NONHSAT126876

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT126876

Source

NONCODE4.0

Same with

,

Classification

sense

Length

665 nt

Genomic location

chr8-:62593083..62596749

Exon number

2

Exons

62593083..62593595,62596598..62596749

Genome context

Sequence
000001 AGAGACAAAG CATGGAGGAC ACAAGAATGG GAGGAAAGGC GGACTCTCAG GAACTTCATT CTTCACGTGG TTTATGGTGA 000080
000081 TTGCATTGCT GGGCGTCTGG ACATCTGTAG CTGTCGTTTG GTTTGATCTT GTTGACTATG AGGAAGTTCT AGGAAAACTA 000160
000161 GGAATCTATG ATGCTGATGG TGATGGAGAT TTTGATGTGG ATGATGCCAA AGTTTTATTA GGCAAGTACA CATTTTATGT 000240
000241 TTTTTGTTAG TGGTGATAAA ATGCTGGAAA CAATTATTTT TGCTTTAATA ATATCTATCT CAATAGTATA TATCTTACAG 000320
000321 GAGACTTTTC TCCCTTAAAT CATATATTTC ATTACTGTTA AAATTTTAAA TGGCTTATTT TTCCACACTC TTTCATGTCA 000400
000401 ATTTACTTTT ATCAATGAAT AAGTGTATAT CTCTTACACA TATATCTTTT GATAAGTATA ATAATTTCAT GTGTGTTTCC 000480
000481 AGATTTAAAG TACTTCTTAT TCTGAACTTA GAATTTGAAT AGATAATATC CTAGTCTGTT TTTAGATATG GTAATTATAG 000560
000561 CCATTTTTCA TTAACATTAC ACATTCACTT CCATTTCAAA ATGTAAATTT CTACAGGCTT ACATAAATTA ATGATGAAAT 000640
000641 AAAAGTGATA ATAAACATCT TAAAA
[back to top]

Predicted Small Protein

Name NONHSAT126876_smProtein_236:337
Length 34
Molecular weight 3793.5723
Aromaticity 0.151515151515
Instability index 43.2727272727
Isoelectric point 4.13690185547
Runs 5
Runs residual 0.0326086956522
Runs probability 0.0
Amino acid sequence MFFVSGDKMLETIIFALIISISIVYILQETFLP
Secondary structure LEEELLHHHHHHHHHHHHHHHHHHHHHHHHLLL
PRMN LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
PiMo iiiiiiiiiTTTTTTTTTTTTTTTTTToooooo