NONHSAT126876
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126876 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
665 nt |
Genomic location |
chr8-:62593083..62596749 |
Exon number |
2 |
Exons |
62593083..62593595,62596598..62596749 |
Genome context |
|
Sequence |
000001 AGAGACAAAG CATGGAGGAC ACAAGAATGG GAGGAAAGGC GGACTCTCAG GAACTTCATT CTTCACGTGG TTTATGGTGA 000080
000081 TTGCATTGCT GGGCGTCTGG ACATCTGTAG CTGTCGTTTG GTTTGATCTT GTTGACTATG AGGAAGTTCT AGGAAAACTA 000160 000161 GGAATCTATG ATGCTGATGG TGATGGAGAT TTTGATGTGG ATGATGCCAA AGTTTTATTA GGCAAGTACA CATTTTATGT 000240 000241 TTTTTGTTAG TGGTGATAAA ATGCTGGAAA CAATTATTTT TGCTTTAATA ATATCTATCT CAATAGTATA TATCTTACAG 000320 000321 GAGACTTTTC TCCCTTAAAT CATATATTTC ATTACTGTTA AAATTTTAAA TGGCTTATTT TTCCACACTC TTTCATGTCA 000400 000401 ATTTACTTTT ATCAATGAAT AAGTGTATAT CTCTTACACA TATATCTTTT GATAAGTATA ATAATTTCAT GTGTGTTTCC 000480 000481 AGATTTAAAG TACTTCTTAT TCTGAACTTA GAATTTGAAT AGATAATATC CTAGTCTGTT TTTAGATATG GTAATTATAG 000560 000561 CCATTTTTCA TTAACATTAC ACATTCACTT CCATTTCAAA ATGTAAATTT CTACAGGCTT ACATAAATTA ATGATGAAAT 000640 000641 AAAAGTGATA ATAAACATCT TAAAA |
Predicted Small Protein
Name | NONHSAT126876_smProtein_236:337 |
Length | 34 |
Molecular weight | 3793.5723 |
Aromaticity | 0.151515151515 |
Instability index | 43.2727272727 |
Isoelectric point | 4.13690185547 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0 |
Amino acid sequence | MFFVSGDKMLETIIFALIISISIVYILQETFLP |
Secondary structure | LEEELLHHHHHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiTTTTTTTTTTTTTTTTTToooooo |