NONHSAT126880

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT126880

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2807 nt

Genomic location

chr8-:62671653..62678528

Exon number

2

Exons

62671653..62674323,62678450..62678528

Genome context

Sequence
000001 AAAAACAACT TCAACGGCCT TTCCATGCCC AAAGACACTG CAGCAGAGCC GTCTATGAAT GACAGATGAA ATGCCTTAGA 000080
000081 GTCTTAGTTC CAAACCACCT CCCCGGACAG TCGGAAATCC CACTGGCTGG AGGAATAAAT AAATTCCTTA TCTTGTCAAG 000160
000161 GAAGCTCCTC CCAAGCTACA AAAGTTGCAG ACAGCAAAGG GATCAAGTGA CCCCAGAGAT GAAATCTGTG ACTCTCTGGT 000240
000241 GGAGCAACAT GATAGTAATA AACAAAGGTT GAGTGCCTGC TGTATAAAGC AACCTCTGGA GTGCCTGATA TCTACTAACT 000320
000321 CTTTTAGCAC CCACTCGACC CTGTGAGATG CGTATTACTT TATTGTATCT ACCACTGTAA AAAAGAATGA ACCAAGCTAC 000400
000401 AGCAATATTA TGTTGCTTGC CCTGAGTCAC ACAGCTGAGT AAGTCACAGG AGTTTGTGCT CATAATGACT TTGCTATGCT 000480
000481 GATGTTTGAA CCTGGAACCA TTCAGCAACC CTCCAGCTAA TATGGCTCCA TGCTCTACTT CTGGAAAAGC TGAGTTCCTG 000560
000561 CAGCCTTGTC CTACATCACC CAAAAGAGCT GGAAAAGAAT GCAGTGAGTT CCATTCTATT TGTTCCGAGA ATAGGAAAGC 000640
000641 CACATTGAAG CAATATCTTA AAGAGAAATC TATAGTTAGG AGTGATGAAG ATTTGAAACA GATGTCAGCA GAAAGAAAAA 000720
000721 GGGAGAGGCA CCATGATAAT TATACTCAGT GATGCTTTTT AAATGACATA TATTCAGTTA AATATAGGGA GGTTTGCTGC 000800
000801 TAGCCATATG AACAAAGCAC AAGAGAATTC CTGGATCAAG GCAGACTTAA AGAGACATTG AAAAAAAAAC AAAATTCAAA 000880
000881 ATTTTGACCT AGTGCAGGAA GAAGTGCAAG TACAGGGGAA GTGGAGGGAA GGAGTGGGGA GGCTGGCACA GAGATGGCAC 000960
000961 GGGCAGATAC GAGCAGATTG ACTCGCCAGG ACTGTCATTG GGCCACCGCT CTTAGCAGGA ATTTCACCAT TGAATGACCT 001040
001041 AATTATTGTC TTGGGAAAAA CACAAGAGCT CCTGTCCATA ACAGGATAAC AGATGTATTT CAGTGGAGCA CAGAATAGGC 001120
001121 CGGATGGTGA CTAGCAAGAA TAAAAGCCCA AGTGGACTGA AGAATCCATC CAAGATATGG TCAGGACGGG CTTGTGGAAA 001200
001201 ACTTGTGCAA TAATGAGAGA AATGTTATCT GTCACTACCT TTTTTAGGCA GCTGTGTGGA TAAACCTACT TTGGGGTAGG 001280
001281 AGCTGAGCCT CAGGCCTGTG ACCGCTAGAA GCCAGACTTG AAGCCAGGAA AGAGGCCGCT CTTCCCAGGA GTTGGGAGAA 001360
001361 TTTGACTTTG GTGTAGAATC CAGAAGGCGG GAGAGAGGGT TCCAGGGAGG AGCTGGGGGT GGAGGCTAAA AAAGGAGCCC 001440
001441 TGGTTGCCAA AGCCAGGAGG TGACTTTACA GGAGAGCAGC AGTGACTAAG CCAGGAAGTG ACTTTGCGGG AGAGCAGCAG 001520
001521 TGACTAATTC AGGAGGTGAC TTTGCGGAAG AGCAGCAGTG ACTAAGCCAG GAGGTGACTT TGCGGGAAAG CTGCAGTGAT 001600
001601 TGTGAAGTTG TTCACATACA GGGGGTCATG GGACACCCTC TACGATCTCC CGTGGGAAAT CCTCAGTAAG CACTCTCACT 001680
001681 CTAGCAATAA GCACTCTCAC TCTAGAAAGC CCTTTTGGTG CTTCCAGTCA CATTGCCTGG CCCACGCTCG GTGAGAGCTC 001760
001761 ACATGCGCTT CTGGTCCTGG CCTTCTCAGA CGCCACAGTA GCTGCCCACC CTGCAAAAGA CCTGGAAGGG GAGGGGAGCC 001840
001841 TGTGCCACAG CAGCCAGAGG ATGAATGTCA TGTCATGAAC AATTCCTGGG GGCACTATGT ACATTTTGTA GAAGTCCTGC 001920
001921 CAGAATGGAA CCTTGCTGTC TACAGCAGCG ACCTTGATAA CACATCATTT GATTTTTCCT CCTTTTGTGA CTCATGCTTC 002000
002001 TGCTACCTCA CCCTGGCTTC CTGAGATCAC CTCCCAGATG AACTCCCTGC ACTGAATTCT GGTCTCAGTT TGCTTTGGGG 002080
002081 AGAACTCAAA ACTAAGACAT TCACCACTGT GTTTGTGTGA GCCAAATCTT CACATCATGA GCAGGCGCTA TGTCTGCGTT 002160
002161 CAGCCAGACA AACAGCAAAC CAGCAACTGC CCACATGAAT ACAGTCCATG GACAAGAGGA GAGTGATAGC TGAGCGACTT 002240
002241 TGGGACTTGC TGTCAAAGAT ACCTGTCTCC CTCTCTTTCA TTCTCTTTAC CTTTCCATCA GACTATGTGG CTGCCTCATT 002320
002321 CCCCCGTGTC CTGCAAGCAA GGATATTAAC TATACAAACA GTCCAGCTTA AAACAAAATG GGCAGAATAT TTGAATAGAC 002400
002401 ACTTCACAAA GGAAGACAAA CAAATTACCA ATAAGTGTGT TAACAATTCT TAACATCGTT AGTCATCAGG GAAGTGGAAA 002480
002481 TTAATACCAC AAGGAGAAAT CACTACACAC TAAAGTGGCT AAAATGAAAA AGAGTAATGA CATCAAATTC TAATCTGAGT 002560
002561 ATAGAGCAAC TGTTGATGGA AATATAAGAT GGTACAGCCA CTTTGGATAT AATAAAATGA TGCAACCACT TTGGAAAAGT 002640
002641 TTGGCAGCTT TATGTAAAAC TAAGCAAATA CCTTTGGCCC AGCAATTCCA CTCAAGCAAT CCTTCCCTAA AGAAATAAAA 002720
002721 ATATATATCC GCCAAAAGAT TTGTAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA GAAAAAAAAA 002800
002801 AAAAAAA
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Predicted Small Protein

Name NONHSAT126880_smProtein_2207:2452
Length 82
Molecular weight 9543.0401
Aromaticity 0.111111111111
Instability index 42.9074074074
Isoelectric point 9.91497802734
Runs 11
Runs residual 0.00637723816532
Runs probability 0.0185078126255
Amino acid sequence MDKRRVIAERLWDLLSKIPVSLSFILFTFPSDYVAASFPRVLQARILTIQTVQLKTKWAE
YLNRHFTKEDKQITNKCVNNS
Secondary structure LLHHHHHHHHHHHHHHLLLLEEEEEEEELLLHHHHLLLHHHHHHHHHHHHHHHHHHHHHH
HHHHHLLHHHHHHHHHHLLLL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooooooooo
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