NONHSAT126901
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126901 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1202 nt |
Genomic location |
chr8+:62791441..62798121 |
Exon number |
2 |
Exons |
62791441..62792336,62797845..62798121 |
Genome context |
|
Sequence |
000001 GGTAGGTTCT GACAGTTTCA TCCATCACAA TACAGGCCTC ACCATGTCAC TGCCTCAGAC TGATAAATGC AAAATGACAG 000080
000081 TCATTCATCC GGTGGAATAG AAGAAGCCAG GGAAAATACA ACATGAAGTC ACTTATGCCA TTTGATATAG CTTTGCAATG 000160 000161 TGTATCTTTT CTCTCCCCTA TCTTTTGTTT TGTTTGTGTA CATGCCAGCA TGATTATAGT CTTTGCAAAA ATATATACGA 000240 000241 GACAACACAT TTCCCTAAAA TAAAAAAGTA TGAATTTAGA AAGATTATAG CTACATTAAA ATGAATTCAG AATCTACTAT 000320 000321 GACATAAATA GAATTAGTTA AAGATTAAGG TTAGAAAGTA AATGTCACTT CTTAACTTTT TCTCTTTCTT GCTATTGAGG 000400 000401 AGCACAATCT AAAATTTGTA GGCAGATAGA GTATAAAAGT AATGTACAAT TATGGCACTT ATACTATTTT TTTCTTTTAT 000480 000481 ACAACAATTC TACAAAAATA ATGACTATAT GTACACATTA AAGGAAACTG TAGATTTACT GAAAAATAGG TATTAATAAT 000560 000561 ATGGATATCA ACAGCTGTGT ACCTTTAATT TAAAAATTAA AAAAATAAAA ATAACAGTAA ACTGAAAGTC TCCATTCTCT 000640 000641 CATCTTCCTT TTCCTATGTT TATTTTTAAA CAAATTATAC TGCATATATC GATATCTATT AGGGTCATGT GTTGACTTAG 000720 000721 CAATAAATTT AATTATTGGT TTAGATATCT TACAGATGTA TGGAATCTCT AATATACATA TTTTTGTTTA ATATGTTACT 000800 000801 GAGAAAGAAG CTCAAGTGAT AGAAATAACA CAGGACAGGA AGTAAGACAG TTCTCGTCTG AAGTTCTTCT CTGACAGCCC 000880 000881 ACAAACTAGT TAATATATGT GCCTGTCACA GTCTCCACCA GAAGCTTTAT CTTACTACAG AGTCCAGATG CATTAAGGCT 000960 000961 GTGTTCGAGC CATGATCTTC CTCTGAAGAA GAAATGAAGA AGAAATTTAT CTTATTTTTG GATATAGTGT TCTTAGTTGG 001040 001041 CAGTTTAATT ATTATTTTTA CTTCATCACT TTGTATACGT CATCGCACTT TCTCCTGGCC TATAAGATCT CTTCTGAGAA 001120 001121 ATTTTACGTT CTACTTTACT GGAACTTCAT TAAATATTAT TTGCATCATT TTTAAAAAAA AAAAAAAAAA AAAAAAAAAA 001200 001201 AA |
Predicted Small Protein
Name | NONHSAT126901_smProtein_122:262 |
Length | 47 |
Molecular weight | 5278.4557 |
Aromaticity | 0.130434782609 |
Instability index | 44.2826086957 |
Isoelectric point | 9.05755615234 |
Runs | 6 |
Runs residual | 0.0309265010352 |
Runs probability | 0.062827533416 |
Amino acid sequence | MKSLMPFDIALQCVSFLSPIFCFVCVHASMIIVFAKIYTRQHISLK |
Secondary structure | LLLLLHHHHHHHHHHHLLLLEEEEEHHHHHHHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiii |