NONHSAT127023
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127023 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
821 nt |
Genomic location |
chr8+:67351503..67356916 |
Exon number |
3 |
Exons |
67351503..67351970,67352397..67352434,67356602..67356916 |
Genome context |
|
Sequence |
000001 GCACTCAAGT ATCTACCGAG ACCCAACCAC TGGACAAGGT CTTCTGGGCA ACCCAACGAA ACATAAAACC GTCTTCCCAG 000080
000081 CCTCGATCAG AGAGCGAGCA GGAGAAAGAG AAGCCAGAGG AGAGACTGGG ACTGTCCAGG AAATAGGAGA CGACCAGGAC 000160 000161 AGGAAGAGGG ACCACAGCCA GGGGAGGGAG GGTTTCCAAA AAGGAGGACG TGGGAAATCT GTAGAGAAGT CGACCGAGAA 000240 000241 GTGAGATGCG GTGGCGACCT CGGAGCGCAC CGGGTGTGCG CGCAGCTGGG GCCTCTGGGG AGCGGCGCGG CGGGGACGGA 000320 000321 GGAGAGCTCG GAGCCCGGGG CTGCAACTGG GCAGAGAAAG ATGGGGACCA GGGAGGTCTT TGGGTCCAGG AAGTTCTCCT 000400 000401 GGAGGCTCAG GTCTAGAGCC TGCCTGAAGA AAAATTAGAC ATCTTGAAGA CACTGGGAAA TATATAAGGT GCCAGTGCCC 000480 000481 AACTCATTCT CATACTTACT CCCAAGATGG CTGTTTCAAA TATTAGATAT GGAGCAGCAG TTACAAAGGA AGTAGGAATG 000560 000561 GCAAGTATTC GAGATGTCTA CGGTCTCCTA CTGTAAATGT TACATATCTC ACAAGACCAT GCTAAATGAC AACAATCACA 000640 000641 TCCTCTATTT TTAAAAATGT ACAACGTGAG TTTGCCAGAA GAGTCTATTG CAGTTCTAGT GGAGTTGAAC CTAACTTATA 000720 000721 GGTTTTCTTG TAGGACCTAA AAAACATGGG TGCTAAAAAT GTGTGCTTGA TGACAGACAA GAACCTCTCC AAGCTCCCTC 000800 000801 CTGTGCAAGT AGCTATGGAT T |
Predicted Small Protein
Name | NONHSAT127023_smProtein_245:415 |
Length | 57 |
Molecular weight | 5921.4788 |
Aromaticity | 0.0535714285714 |
Instability index | 40.4339285714 |
Isoelectric point | 6.14739990234 |
Runs | 10 |
Runs residual | 0.0252732240437 |
Runs probability | 0.0418212329977 |
Amino acid sequence | MRWRPRSAPGVRAAGASGERRGGDGGELGARGCNWAEKDGDQGGLWVQEVLLEAQV |
Secondary structure | LLLLLLLLLLEEELLLLLLLLLLLLLEELLLLLLLEEELLLLLLEEEHHHHHHLLL |
PRMN | - |
PiMo | - |