NONHSAT127072
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127072 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
717 nt |
Genomic location |
chr8-:67955314..67968795 |
Exon number |
5 |
Exons |
67955314..67955552,67958047..67958195,67959920..67960094,67963465..67963576,67968754..67968795 |
Genome context |
|
Sequence |
000001 TCCACTTAAT AAAATAGAAG ATTTTGGTGT ACACTGCAAA CAATATTATG CCTTAGAAGT CTCATATTTC AAATCCTCTT 000080
000081 TGGATCGCAA ATTGCTTGAG CTGTTGTGGA ATAAATACTG GGTGAATACG TTGAGTTCTT CTAGCTTGCT TACTaggcaa 000160 000161 gtatattaat agcagccaga agtgacacct gatggcaagg ggagaaaaca ctgttaagac cagaacagtc tgaacctttg 000240 000241 tatgaggcaa gcagatctac ctactcagcc caatgtctgt ccctgtattc cagcactgca tacatgagga cattaataat 000320 000321 caagaaaagA ATGCAGACTA TACCACTGGT CAGGTCTTTG ATTTGTCTGA AAAGTTAGAG CAGTCAGAAG CCCAGCTGGG 000400 000401 ACGAGGGAGT TTCATGTTGG GTTTAGAAAC GCATGACCGA AAATCAGAAG ACAAACTTGC CAAAGCTACA AGAGACAGCT 000480 000481 GTAAAACTAC CATAGAAGCT ATCCATGGAT TGATGTCTCA GGTTATTAAG GATAAACTGT TTAATCAAAT TAACATCTCT 000560 000561 TAAACAGTCT CTGAGAAGTA CTTTACCTGA AAGACAGTAT GAGAAAAATA TTCAAGTAAC ACTTTAAAAC CAGTTACCCA 000640 000641 AAATCTGATT AGAAGTATAA GGTGCTCTGA AGTGTCCTAA ATATTAATAT CCTGTAATAA AGCTCTTTAA AATGAAA |
Predicted Small Protein
Name | NONHSAT127072_smProtein_272:562 |
Length | 97 |
Molecular weight | 10853.0824 |
Aromaticity | 0.0520833333333 |
Instability index | 48.2510416667 |
Isoelectric point | 5.46783447266 |
Runs | 13 |
Runs residual | 0.00118127147766 |
Runs probability | 0.0498552851495 |
Amino acid sequence | MSVPVFQHCIHEDINNQEKNADYTTGQVFDLSEKLEQSEAQLGRGSFMLGLETHDRKSED KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS |
Secondary structure | LLLLEEEEEELLLLLLHHHLLLLLLLLLLLHHHHHHHHHHHHLLLEEEEELEELLLLLHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |