NONHSAT127091
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127091 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2353 nt |
Genomic location |
chr8+:69146910..69149265 |
Exon number |
1 |
Exons |
69146910..69149265 |
Genome context |
|
Sequence |
000001 ATTTTATCAG TTCGCAAATC TGAAGTCTCA TACTGTTTTC TGTCTCTTTA AAACACATTC TTCTGGTGGC TTGGGTTCAT 000080
000081 TGTGCATTCA TTGGCCACTC TTCTTGCAGC AAATTTTAAA TCAATTTAAA ATTAGGTAAA CTTTTTATGA TACTATAATA 000160 000161 TATATGACGT TGAAATGACA TTGGTTCTGA GTCTATTAAT TTAAATTTTG GGATCATTAC ATTCAGAATG AAATGAAATT 000240 000241 GACCTTGATA CTAACTTTGA GAGCCAAAAA AATGAATGGG TAAACAAAGC CTAAGGGTCA TGTTAATTAA TTTAACAAAA 000320 000321 CACACTATTT TCAGTCCTTT GGGCTTGTAC ATTTTATAGA CAAAATTAGT ATTTATTGAT TTGGAAGTGT TCAATTGAGA 000400 000401 GTAAATGACT CTGTGTTTTG AAACTAATAC CTTTGCATTT AAAATACTGA AGTATTATTT TGTTAGTTGA AGTAGATCTT 000480 000481 TTCCTGTGTA GCATGATTTA ATGCAGAGCA GTTATTCACT TATACTTCTG AAAAGCCATA ATATTGAAAT TTAAAATGAA 000560 000561 TAGTCTTACT TTAAGGTCTT TTACTTTACA TTTTACTTTA AAGGTCGTTT TTAGACTTTA TGCACTAGTG GTATTGAAAC 000640 000641 TAACCTTTAA TATTTGACTA AATTGCTTGT GAATTTTTGG AAACTATGTT TAATTTTTAA AGACATTGTT ATGTGAATTA 000720 000721 TCTTACTAAA TTATCACTTA AGAACTCTCT CATAGCAGTA ATTTCATTAA CACATATATA TACTAACCAA TTTGCTAAAT 000800 000801 GAATTGTCGG TTGTCCTGCT TAAGTACTAG GGCCAAGCTT TGAAATGACT TAAAGTGATC TGAATTTTGA TTGAGAAAAT 000880 000881 AATCTGTCTT CTATCGAATG TTTGAACTTT TAGTGATGAG CCTCAGCAAA GTTTCACCCT GCATGAAGCA GAACAGGTGG 000960 000961 GGGAAAATTA CAAGAGGGGT CTGTACCAAA AATGGCCCCA GGATATTCCA TTGAACAAGT ATTGACCATT ATCTTCCTAG 001040 001041 GTGCTACAAC TCCATACTAG TCATTACAAT TAGTCTTTGG TTTCACAGAA ATGTTACTGC TTCAAAGGCT TGGCATTAAC 001120 001121 AGTGATGTCA GCATTCATAC TGCCAACAAT CTGCTGGTCA TACATGGAAG ACTGTTAAAG TGTGGTCTGT GCATCATTGA 001200 001201 GCAATTGTTA TGTAGACACA AGGCCTGCTT CACTCAGGAT AGCTTGCTCC TCTCGCTGAG AAGAGATACC TGAAGTCTAC 001280 001281 TAAGTCTACT AAATGAGATA TATATGTGTA TGTATATGCC TATATATATT ATTATATTTA CTAGTGTTTG TGATAATGTT 001360 001361 ATAAAAATTA ATAAGATTGT TTTGTTTTGT ATGAATGTAC GACAAATCGA GTTGTTCAAT GTATTGAATG AATGTCTTAC 001440 001441 TGTAAGCATC AGAGCTGTCC AACCATGTGT AAATGTACCT GGTCTTTTGA TCACTGACAC TACTTTGCTG TTCAATCTGG 001520 001521 AATCAACTGA CCTGGCTCTG CCATTGAGAA ATAACTAATT TAGAACAAAA TTGTTAAATT TTAAAATTGC ATTTCTACTA 001600 001601 GAAATAGCTT TGGAGAGTTA ATTTTAGGTG CGAATAACAG GATAAATGCT ATCTGATCAA GCATTCATCC GAAAAATGTT 001680 001681 TTTGAGAATT CACTTTGTGC AAGGCACAGC TGTTGGGGCT GGTATATGTG TGGACATGTT TGATTTGAAA ACCTTCGTGG 001760 001761 TGTCTCTGTG TGTTATTGAT CATCTGTGTC TTTTGCTTAA AATGGCATTA TTTGTAACAC AAACCTAATA TCATATATAC 001840 001841 AAATATACTG TATGTAGCCA AGAACACTAA ATTGGTAAGA CGCTTTAGAA AATATACATT TGAATTTGAA TATCTAATGC 001920 001921 CTCAAGCAAA TTTATTAGAG TTTCAGATGA ATATATATTT TTGTAACTGG CAAGTAAATG AGTAGAACAG AGCTTTTTGC 002000 002001 CTAAAAATAT TTTTATAAGT ACTCATTTAC ATAGTATTCA TTATTTTAAA TGACAAAATA TCAAATTGGT TCTATAAATA 002080 002081 GTAATTGTTT TGAATATATC CATACTTAAC ATCATATGAA ATCCAAAATT TAATGATAAA TTTCATCTGG ATGTGTTATT 002160 002161 ATAAAAGTCA TCTTTTTTTC CTTTGTAAAA TATCCATGTA ACATAGCTTC CATTACTCCA TATTTTATGT ATGGTTAAAA 002240 002241 TTATCAAAGT GCATTATGTA TTTTATATTG TTTATTTTTG TCTGCATGAA AGATTGGAAT AGTAACCGTG TATGATAAAT 002320 002321 GTTAATAATA ATAAAGTGAA ATGTAGTATG ACC |
Predicted Small Protein
Name | NONHSAT127091_smProtein_275:358 |
Length | 28 |
Molecular weight | 3087.7853 |
Aromaticity | 0.0740740740741 |
Instability index | 59.262962963 |
Isoelectric point | 10.2890014648 |
Runs | 5 |
Runs residual | 0.0214707461084 |
Runs probability | 0.0365836424661 |
Amino acid sequence | MGKQSLRVMLINLTKHTIFSPLGLYIL |
Secondary structure | LLLHHHHHHHHHHLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |