NONHSAT127141
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127141 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1281 nt |
Genomic location |
chr8+:70746364..70750064 |
Exon number |
2 |
Exons |
70746364..70746428,70748874..70750064 |
Genome context |
|
Sequence |
000001 CCGGCGTACT GGAACCTCTC TCGCGATCCC GCACCCAGCT TGAATTCAGC AAGAATCGAA AACAGTCCAA CAACCGTCGT 000080
000081 ATCTACAGCG ATCCTTAGAG AACAATTAAG GCCAGCTGAC AGTAAAGAAC AATCAGTGTG TATTTGAAGT CCATGCTGAG 000160 000161 AGAGCATCAA TCTTCTGGCA GCTGCAAGAC TGACCTATCA ACCGAGGCAT TTCTTCATTC CCTGCCATTG TCTCCTCCTC 000240 000241 TTGAGATCGC CATCAGGCAC AGTCACTTTT CTACAAACAG GCAATAGGAC TCCCGCTGCC ACCCTGCCCA GATTTTAGTC 000320 000321 CTCTACTGCT GATAAAGTGA GCAAAGATAC GTGGCACTTC CTGAACCCAA ATACTCTTCT GAGCTGATTC TAAATCCACA 000400 000401 CAGAATCAAC CTACCTCCTA TTACCTCCTT CCAAGCTCTG TGTCCCATTC TCTCATTTCA GTCTCAGCTC CAGACATCAG 000480 000481 TGAATTCAAT GTGATACATC AGGGGACATC ACAGGACTTC CCTACTTGAA AATCAAGCAA TCGTGTCCCT GAAACACTCT 000560 000561 GTCTTTATTC ATGCTCAGTT ACCGTAAAGT AGATGCAACT CTAAGAACCT ATGGATTTTT TTATTGCCAC TAATAGATCA 000640 000641 TGATTTACAG CAAAATTTTA AAAGGTCCAA TTTTACTCAC ATAAGAAGAA GAAAACATTC AGCAAGAAGC ATTTCTTTTG 000720 000721 CTTTATCTTT CCCAGTTAAA TATGACTTTA AAAAAGACAA AATTTTAAAA GGTCCAATTT TACTCACAAA AGAAGAAGAA 000800 000801 AACATTCAGC AAGAAGCATT TCTTTTGCTT TATCTTTCCC AGTTAAATAT GACTTTAAAA AAGACAAAAT TTTAAAAGGT 000880 000881 CCAATTTTAC TCACATAGGA AACAAGAAGA AAACATTCAG CAAGAAGCAT TTCTTTTGCT TTATCTTTCC CAGTTAAATA 000960 000961 TGACTTTGAA AAAGAAGAGC ACACCTCATT AGCCGTAATT GTCTGATTAA TACAAAGAAA TGGACTCATA TCACGGGGTT 001040 001041 CTACTACCCC TATGGTAGTG TTTACTATCC TTATTTCACT CAATAATTAC AGTTACTTTA ACCAGAATGC CTGCCTTGTT 001120 001121 TGGCATTTTG GGAGAGGAAG CATATGACTG TAAACCCTCT TCAAACTTTC AGACTTACGT TTGCTTCTTC TAAGTCCATC 001200 001201 GACTTTATAC ATAAATGACT TCTTTTTAAA AATAAATAAA TAAATAAATA AATAAAAAAA AAAAAAAAAA AAAAAAAAAA 001280 001281 A |
Predicted Small Protein
Name | NONHSAT127141_smProtein_152:286 |
Length | 45 |
Molecular weight | 4960.5224 |
Aromaticity | 0.0454545454545 |
Instability index | 64.6863636364 |
Isoelectric point | 6.89361572266 |
Runs | 5 |
Runs residual | 0.0494652406417 |
Runs probability | 0.0421480303833 |
Amino acid sequence | MLREHQSSGSCKTDLSTEAFLHSLPLSPPLEIAIRHSHFSTNRQ |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHLLLLLLLLEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |