NONHSAT127158

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT127158

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2362 nt

Genomic location

chr8+:71383369..71397922

Exon number

5

Exons

71383369..71383704,71383711..71384080,71390328..71390398,71392957..71393543,71396926..71397922

Genome context

Sequence
000001 GTTTTCTAAG ACCTCCCTGG CCCGCCATAC GCCGATCCTG AACCTACGAA AACCCAAGAC TGCGGGCACG GTGGCTCATG 000080
000081 CCTGTAATCC CAGCACTTTG GGAGGCCGAG GCGGGCAGAT CACGAGGTCA AGAAGTCGAG ACCAGCCTTG CTAACATGGC 000160
000161 GAAACCCTGA CTCTACTGAA AATACAAAAA TTAGCTGGGC GTGATGGCGT GCGCGCCTGT AGTCCCAGCT GCTCGGGAGG 000240
000241 CTGAGGTAGG AGAATCGCTT CAATCCGGGA GGTGGAGGTT GCGGTAAGCA GAGATTGCGC CACTGCACTC TAGCCTGGCG 000320
000321 ACAGAGACTC CTTCAAAAAC AACAACAACA ACAACAACAA AACAAAACCT CCCAAGACCC TAGTGGGCAG ACACACAGCC 000400
000401 AGCCAGACAT GGAGAGGAGC ACATTAGCAG AAGAAGACGC AAGTGGCTGG TCCTCGAGAG GACGTTGAGA GGAGCATGCC 000480
000481 AGCAGAAGAG CACACAACGA CAGGCACCGA CACACCACCG GCAGGCCATG CACCAGCAGA ATGATGCGGA GTTTGACGGG 000560
000561 GCAGTCAGAG AAGAGCCTGG GCCGCCAAGG GGCCCGACTC CAGGGGAAAA CCATCTCCCT TCTGGCTCCC CCATCTGCTG 000640
000641 AGAGCTACTT CTACTCAATA AAACCTTGCA CTCATTCTCC AAGCCCACGT GTAATCCGAT TCTTCAGTGT CACCTCCCAA 000720
000721 ATGTGGAAAT GCATTGTCTT TCTTCTTTCC TAGGCCAGTG GTCCTCAAAC TTGAGCAGGT TTAAGCATGG TCATAGCAGA 000800
000801 ATCAATGTGC TCACCCCATC ATGAAAAAAA AAATGTGTTA ATGAATTGAT TACTACTTTG AGTGTGCCAT ATTTTAAAGA 000880
000881 CGAAGAGAAA CTAATCAAGT TAGTTTTTAT TTGGTCAGAG GCTTGTTTGT GCCTGCTTAT CTAAAGTTAT AAAGGCCCCA 000960
000961 AATATGGCTC CGTGTTGCAG AGGGACTGTC TCTTCTTATA TCGACAGAGC CCATATTCAC AATGTATCAC ACTTACCTCG 001040
001041 ATGTATTGTC TGGAGTTTCC TAGGCTGTGT CCTTTGCCTG GAATGCTCTC TCTTGCTGGC TGGCTTCTTC CCACCAGCTG 001120
001121 TGGCCAGGGC TGCTCCTTAT TCCTTCATCA AAACTCCGTC TGCTGGGTGT GGTGCCTCAC ACCTGTAATC CCAGCACTTT 001200
001201 GAGAGGCCAA GGTGGGAGTA TCGTTTGAGC CCAGGAGTTC AAGACAAGCC TGGACAACAG AGCAAGACCC TGTCTCTACC 001280
001281 AAAGAAAAGA AAAGAAAAGA AAAGAAACAG CCACTTTCTC TTCCATGAGC CAGTTTATGT TTTCTTCACG GCATTTGTTA 001360
001361 CAAATCACAA ATGTGGAGGA AAAATGAAGG CAAAGCAAAA TAACAGGCAA GTCTGAAAAC AAAAGTGTTG CCAGTCACGC 001440
001441 TAAGCCTCAG GCACGCATTC TGAATGAAGC TAAAGTTTAA AGTCCCCTCT GATAGATTTG TGACTTAAAT GTCCACACTA 001520
001521 GCAAGTGTGT TTCTCACATG GAGAAGTAGC ACGATTTTAT GTCAGGAAAG GGATGAGAAC ATGCTTCTTG AACACATACA 001600
001601 ATGCTGAAGA CATTTCCTGG AAAACCATTG GCCTTTGCTT AGGACAGTTG CATCACACAG AGATGTTTGT GGTTCAGATT 001680
001681 TATAAGAAAC ATGGGAACTG AAGCCAAAGC ACTACTTTTG CTCAGTATAA CCAGGTGCCA GATCTAAAGT GTTAGGCAGG 001760
001761 TTCCTATATG TATGTTAGAA AAAAGTTGCC CAAGTTTTGG ACAATTCCTT TTCCATCTCT CTTACAAGTC AACAAATCGA 001840
001841 AGCAATAAAC TATTCTCTGA AGAAAACAAA TTTATTTGGT TGATTCAAAC TTTTAATGAG ACTATTACTC CCCTGTGTGC 001920
001921 CTTTCCTTTC TCTGGTTCTA GAAATACATC TAGAAAGGGG GAAAATGTTA ATATATTTTC TACTGACTTT ATATCACAAA 002000
002001 TGCTTAGCTT AGAGGGTGGA CTCTGAGGAA CAGTGTCCTT TCCAAATATT ATAAAACTTT GTGTTCATTC TGGAAAAACA 002080
002081 AACAAAATTA ATCACAATGA TTTCCTGCTT TGGAGCAATG AGAAATGGGA GGGAAACTTC ACCTTTTCAT AGCTTTTGAT 002160
002161 GTTTGCACCA TGTGAATTAC CCACCCCCAA ATTTAAAATA CGAATTTTTG AAAAAGTGTT TACCTCTGAG AAGAGAAACT 002240
002241 AGTAGTGAAG AATGAGGAGC TGTAGATTTT TAACGATTCT GATGTATTTG CGTTTTTCCC AATGTTCATG AATAAATAAA 002320
002321 TGTGCATTCA TAATTAAAAA GAATAAACAA CCTGGAAAAA AC
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Predicted Small Protein

Name NONHSAT127158_smProtein_1040:1201
Length 54
Molecular weight 5867.0686
Aromaticity 0.11320754717
Instability index 55.058490566
Isoelectric point 6.48040771484
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0773420479302
Amino acid sequence MYCLEFPRLCPLPGMLSLAGWLLPTSCGQGCSLFLHQNSVCWVWCLTPVIPAL
Secondary structure LEELLLLLLLLLLHHHHHHHHHLLLLLLLLEEEEEELLLEEEEEEELLLLLLL
PRMN LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHL
PiMo iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTi