NONHSAT127244
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127244 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1367 nt |
Genomic location |
chr8+:74234075..74235543 |
Exon number |
2 |
Exons |
74234075..74235045,74235148..74235543 |
Genome context |
|
Sequence |
000001 CAGCAAAATA GGTGGAAGGT GATTTGAATC ACTCCAAAGT CAGGCTTGGA GTCCCAAGTC TGACCTGGAA AATGGACTCT 000080
000081 AGCTCTGCCT CTTATCCCAC ACATGTGTGT GTCTGTGTGA ACATGTGTGT GTGTTGGTGG TTTGTTTTGT TTTGTTTTCC 000160 000161 TCTTATGTAC TTGGGAAGCA GTTGCTGAGG GTCTTGCGGA GCTCTGTTTC CTCCAGTGTA GCATAGCAGC AGGTGCAGGG 000240 000241 GTCCAAAGCT ATGGTGGCAA AATGAAGAAT GAAAGGAATA AATTGCACAC TATCATTTCA ACATGTAACC CAGTGAATCA 000320 000321 AACTGAAGGT AGGATGTCTA TATACCCTTC ATTTCAGGGG CCCCTAGAGA ATATACCTTA GCTTTCCCTC TTCCGGCATC 000400 000401 CTGGAAAGTG GATACCTGTG GCCTTCCTTT CACTTTGAAA GCTTACACCC TCATTTTGAC TACAACTAAT ACTAAAAGCT 000480 000481 TGGCATCTTG CTTGAGATTA GTGTTTGCTA TGCCAAACAC CTTCTCCTCT TTCTATTGAA AGCAAAACAT AGGAAAATAA 000560 000561 TTTGAAATAC TTTTAAGGCA TCTTAAAAAC ATGACTTTTT CATCTTATGG AAAAGCAGAC CAATTTTGCT TTTTTTTCCC 000640 000641 AACTTGTTCT CCAGACTGTG CCaataaaat gtgttcatag caggaaaatt tggaaaatac agaaaagcac tatgaagaaa 000720 000721 acaaaatgta cccaaaatcc catcactcag ataacatcac tgttaatgtt ttgatatgta tttccagtct tttctatTGT 000800 000801 GTTAATTTTT CATTTTGTTT TTGAATAAAT AACTTTCAGG AAAGAAATTG AGCCTTTTCT GCCACCTCTG AAGCCTGATT 000880 000881 ACTGTGTGAA GCAGGCCATG AAGGCCATCC TCACTGACCA GCCCATGATC TGCACTCCCC GCCTCATGTA CATCGTGACC 000960 000961 TTCATGAAGA GCATCCTACC ATTTGAAGCA GTTGTGTGCA TGTATCGGTT CCTAGGAGCG GACAAGTGTA TGTACCCCTT 001040 001041 TATTGCTCAA AGAAAGCAAG CCACAAACAA TAATGAAGCA AAAAATGGAA TCTAAGAATC TTTTTGTATG GAATATTACT 001120 001121 TCTATCAGAA GATGATCAAG ATGTTTCAGT CCAGTGCACA TCAGCATTGC TGACATTTTA TGGATTCTAA ACTTGTGTTG 001200 001201 TTTCTTTTTT AAATCAACTT TTTAAAAAAA TAAAGTGTAA ATTAACCGAC TAGAGTACTT GGAAAATGTG ATCAGTACAA 001280 001281 GTGAACTTAG GTTGTTGCCA ACAGGGTCCT TTTAGGCAGA ACCCAGAAAC CAGTCAAATC TGTAGAGAAG CAGTGTGACA 001360 001361 TCTTCAG |
Predicted Small Protein
Name | NONHSAT127244_smProtein_71:187 |
Length | 39 |
Molecular weight | 4318.1327 |
Aromaticity | 0.184210526316 |
Instability index | 53.4157894737 |
Isoelectric point | 5.05926513672 |
Runs | 9 |
Runs residual | 0.0642313019391 |
Runs probability | 0.0276158511453 |
Amino acid sequence | MDSSSASYPTHVCVCVNMCVCWWFVLFCFPLMYLGSSC |
Secondary structure | LLLLLLLLLLEEEEEELLEEEHHHHHEEELLEEELLLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
PiMo | ooooooooooooooooTTTTTTTTTTTTTTTTTTiiii |