NONHSAT127291
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127291 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1100 nt |
Genomic location |
chr8-:75307392..75320891 |
Exon number |
2 |
Exons |
75307392..75307976,75320377..75320891 |
Genome context |
|
Sequence |
000001 CGCTTATAAA CAACAGAAAT TTATTTCTCA TAGTTCTGGA GGCTGACAAC TCCAAGATCA AGGTACTGAC AAATCCAGTA 000080
000081 TCTGGTGAGG ATGTGTTTCC TGGCTCATGG ATGGTGCCTT TTCATTAAGT CCTGAAAGAC TAGTTGGAAA GGGAAAGGCA 000160 000161 GCTCTCTGAA GCCTCTTTTA TAAGGACGCT AATCCCATTC ATGAGGGCTT CGTCCTTTTG ACCTAATCAC CTTCCAAAGG 000240 000241 CCCCACTTCC TAATGCCATC ACACTGGGGA TTAGTTTTCA ATAGATGAAT TTTAGAGCAA CACAAACATT CAGACCATTT 000320 000321 CAAGCCACCT CCACTTGGAG ATACCCTGGG AGAACTTGAC AATCTCCAAT GGAGAATGCA TTCAAACCAC CATAGAAATA 000400 000401 CAAAAATAGA TGCAGGGAAG AATTTTTTTT AAAGCCCGTC CTCAGAGAAG ACAATAAAAC AGATATACTT TCACTCTTCC 000480 000481 TCTTTTCTTA TTTTGGAACA TACAGGCCTC GAGTGAGGTG TTTTAATAGT TGGCTTTATT TAGATTTGAC TGAAGATGCA 000560 000561 ATTAAATCCA CTCCCATGTT AGAGTTTTCC ACAGCATTGC AGACACGCCC ACATACATTA GGGCAACAGG AAATTACTAA 000640 000641 ATGGCAATGC GCTAGTGTCA CTCATATGAA AGCAGGATTG TGTGACCCTA TGTTTAACCT CAACATACTG TATTGCATGC 000720 000721 ATACTCACAG CAACTTAGCT TAGGACAGCT ACACAATGAA GTTGTCTTTT ATACAAAGGG ATTGATTATT TCTCTTCATC 000800 000801 CAATTTACTA TTGTTCTTCA AGAAGAGAAA GGACATGAAA TTAAGATTCC TGTATTCTGG GTGTTTAATA CCCAGACTGT 000880 000881 TTAATATCCA GGTGTTTAAT ATCCACCTCT GACACATACT GGAACCTTTA CATGTAAGTC AGATACAGTA CTTGGACAGG 000960 000961 ACCAGGTCCC TGAACTTAAA AGTAAGATTG GTAGACACTA AATTGCACCA CATTTGAAAT ATGTTATTGA AGTGGTGTCC 001040 001041 ATACTCACTA ACATGCTTAA AAATTCTGAT CAAAGCCCAG GTTTATCTTC TATAAAATAA |
Predicted Small Protein
Name | NONHSAT127291_smProtein_575:742 |
Length | 56 |
Molecular weight | 6263.2355 |
Aromaticity | 0.0727272727273 |
Instability index | 54.06 |
Isoelectric point | 6.88018798828 |
Runs | 9 |
Runs residual | 0.0121212121212 |
Runs probability | 0.0474101552533 |
Amino acid sequence | MLEFSTALQTRPHTLGQQEITKWQCASVTHMKAGLCDPMFNLNILYCMHTHSNLA |
Secondary structure | LLEELHHHLLLLLLLLHHHHHHHHHHHHHHHHHLLLLLLLLLLHHHHHHHLLLLL |
PRMN | - |
PiMo | - |