NONHSAT127350

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT127350

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5454 nt

Genomic location

chr8+:77914715..77920168

Exon number

1

Exons

77914715..77920168

Genome context

Sequence
000001 AATGTAAATA AGACATTGAT TTATGTCCCT AATATAGTTT TAAAATGCTG ACTTTAAGAA GTTAAATTTA TTCTAGAATA 000080
000081 TTATGTAGTT CCTAAATCAA TATATTTGAG TCTTTTAGGA AAAAGTTAAG TATGGATCTt atattagttt accattaata 000160
000161 ctatttctgt aacaaagtta gaagctcaaa ccaccaccaa tttattacct tacagttctg tagtcagaag tccaacatgg 000240
000241 ttctcaatgg cctaaaatca aggtgtccac aggattgtgt tcctttctag agaggtaagg gaagaatctg attttttttt 000320
000321 tttttttgct tattcaggtt gttggacaaa ttgagtccct tgctcttgta gctgttctcc ctgtttcttt gctggctgtc 000400
000401 agctaagagc tgttttcagc ttctagaggc cactcacatt tccttggtta tggccctctt cgtctccaaa gccagcaatg 000480
000481 gtggattgag accctttcat ccttgtaaat ctttctttct tcttcttcca ttgctgtatc tctccaatta cagcctttta 000560
000561 agaatccatt ggttagacag aatctccccc gctcaaggtt cataactttt atttacatct gcaaagttgc ttttgcggta 000640
000641 ataatgtaac atattcacag cttacaggga ttggggaatg gatatattta ggagccatta ttctacctat ctcaGATCTC 000720
000721 AATTGGGGCC ATGCAGTATA TCCAGTGTTT CATACCACTA TTCTCAATAC TTTATGTTAG AATAATAATA TTGataatag 000800
000801 gtaaattttg ttggttatat aatatgctca aggtactttt ctgagccctt ttactaaatt cactcattta atcctcagaa 000880
000881 ctaccctagg aggcaaacac tgttattgtt cccactcaca gatgaggaaa caggtactga aagctgaagt aacttgtcga 000960
000961 atttctcaca gccattaaat ggtgaaatgg agatctgaac ctaggtagtc tggttccaga gcctgtgcAT GCTCTGAAGC 001040
001041 TCAACATAAT AAAAATAATT TCTACATACC TGGATTTAAC TAAACATGTG TTGatgatac agtggctatg aattcaggtt 001120
001121 ctgacatcac cttgtggatt caaattctac ctacccatta ctgaatgacc ctgggcaagt tacttgacct ctctgagact 001200
001201 taacaataaa ctgaaccaat aataatagtt gagaattaaa caaatactat atgtaaggta cttagagcac tgcctctaca 001280
001281 tacagtcatt cataacaata gagatacgtt ttgagaagtg cgtcattagg ctattttgtt gtgtgaacat cgtagagtgt 001360
001361 acttacacaa acctagatga tgtagtctac tacataccta ggctacatgg gataaccttt tgctcctagg ctacaaaccc 001440
001441 gcacagcgtg ttactgtact gagtactata ggtagttgta acacagtggt aagtatttgt gcatctaacc atgtctaaac 001520
001521 atagaaaaat tgcagtaaaa atacagtatt ataatcttag ggaccactgt tgtgtatgtg ggccatcatt gactgaaaca 001600
001601 tcattatgca gtgcaAGCAA TTGCTAGCTG TAATTATTGA TGACAATTCA ACTTTTAAAA ACAGTATTTA TTATAAAAAG 001680
001681 AAATGTTTCC TTTAGAGATC AGTCTTTCCT TGTAAAATAA AAACTGAAAA TTAAAATTTT TACTTTAATA CACTACAGTG 001760
001761 CTATCTCCTT TCTCAGACTC TGATTTCTCC TCACTCTAGG CTAGCATCTA TCGTTCTAAC CATGGTACCT TCAGTGTTAT 001840
001841 CTGATCATGC ATTCTAAATA CTTTGTCCAG ATCCTAGTAT CTGCAGGCTA ATATTCAAAC TCTCTAGAAG GGCACCAGGA 001920
001921 CTTTTCACAC ATTCCAGAGA CTCTCTCTTG CCATTCCTCT GCTGGGTATT TACACAGCCA TCAATTCTAA CTTTTCACTG 002000
002001 CTCTCGTTTG CTATTATTAT TCTTTGAGGG AGACTTATGT GTGTGGAGGG GACTCTGGGG AGTATGGACA ATGTCATATC 002080
002081 CTGGGTCCCC TTCCATAATG CCTGCTAATA CCACTCCAAA TTCACTCTCT CTTTTAATAA TCTTTCCTGC ACTTGCCTTA 002160
002161 ATTCAAACCC TCATTATCCT TGCACTTTAA GCCATCTCTT AACAAATTGG TGGCCTCCAG CCTCACTGCC CTTCAGGCTT 002240
002241 ACTATCCTTG CTTGCTGGAA TGATCTCTAA ACTACAAAAC TCTATATGTT ACTCTCCTTC TTCAAACCAT TCAGTGTCCC 002320
002321 CTCTGCCAGG TCCTACAAAT ATTACTCTTT TTTCTGTGCC TCTTGGTACC AGTTACATGC TTCTACCGTA ACTTAAAAGG 002400
002401 TGTCACACAG TTGTTTATTT AAATACATAT CTTCCCTTCT AAATCAGGAG CTCATGGATA ATAGAGCCAT AAGAGATGGT 002480
002481 TTTGCTTTAA TGAATttata ttatttcatg ataacataaa ttattgtatt attgtatcat ctgtctcttg tcactaatct 002560
002561 gtgaactctt taaggggaga ctaattgttt tattcatttc tctttttcct ctatgcccgt ggcataggag gtacttagta 002640
002641 attggtcaat gaatgaTTTG GGAAAAATAA TCCAGAATAT ATACAATTTT TTAGTCTGCT TCAGTCTAAA TAAATATATG 002720
002721 AAACTATGTA TTTGGAATAT ATATGATTTC ATTATGATTA TTATATACAA TTCAATTATG ATTTTAGAAG AAGCATAATT 002800
002801 CCTGTACTCT GGAGCCAGAG TGcctgagtt tgaattctgg ctctgccact tacaagcttg gggaagtttt cttggGAAAG 002880
002881 CTAATCAAAA TTGTGTTTGt tgtttgtctg tagaagaaga atgataatag taactgtctt ttaagttaat agaactaaat 002960
002961 gaataatatt tataacgtat ctatgacttt agactctata atagtgtcta ccacctagta aatgttctac aagtgcttgt 003040
003041 taAATAAAAA CATAATAGTT TTTATTCTCA TTGCTTTTGA TGATAGGTAA TGGTCTTGAA ATACAATGAT TTAGAAAAAA 003120
003121 TCGTCCCGTA CTTTCTAGTG GTGTTTTGAA CTAGTTTTTT TACTCAATGA TTTTTAATAT TGTACATTCT AGAATGATCA 003200
003201 TATATATTCC TTCAACATTT AGAGAGTACC TGTGTGTGAT CTCTCTCAGG AAACACTTAC ATATTTTCTC TTtgtattat 003280
003281 ttttctgttg ccattataac aaattaccac aaacttagtt gcttaaaaca acgtaaattt attatattat tattctatag 003360
003361 atcagatgtc tgacaataat ctcaccaacc taagatcaag ttgacagcag ggtagcactc tttactggag actgcaggct 003440
003441 agaatctgtt ttcttgcctt ttcccatttt ggaggctgtc cacattcatt ggctcttggc ccccttcttc taccttcaaa 003520
003521 gcctgcaatg ttgcatctct ctaatcattc tggcataatc acaagtgttt ctctgaccac agccaggaat ggttctctgc 003600
003601 ttttaaagga ttcttgtgat aaaattggac ccacctggat aaaccatgtc agtcttccca tttcaagaac cttaacttga 003680
003681 ttacatgtgc aaaattcctt tccctatgta aagtaattta ttcataagtt ctatggattg gagtatggac ttctttggag 003760
003761 gactgttatt ctgcctacca caCTCTTGTA CTGTAAATGA GTCACTGTGG AAAGGTAATA GGTTGTAGCT TCTGAAAATA 003840
003841 AAGATAAATG TTAGCTAGAT TGTTAACAGT AGTGTCAGTA TCATTTATGA CTCTACTGGT TGTTGAGAGC GAAGTTGGCT 003920
003921 TAGTAGAATG CTTAGGTACT GCAGGGCTCA CTGATTATGT CTTTGTCTCC TAGGATTTTT ATTCTACTAG AGAGGGAAGA 004000
004001 ATACATTCAT atttgttgca tatctgccgt gtcctaggta ctctacaatg aactacagat acattaatcc catttaattt 004080
004081 ccacaataac tttatgaggt gtggtaggag gccttctaag atgacccaat gatctccatc acatagcact cacccccttg 004160
004161 tataatctcc ctcctttgaa tgtaagctta acccagtgac tctaccaatg aacagagtag gacaatagtg atagtatatc 004240
004241 atttctgaga ttggattcca gaaaactatg acttgtctct cacttacact gtctgtctct tgccctctta tttgcttgct 004320
004321 ttgatgaagc aagctgcagt gtggtaaact gcctttgaaa gagacccaca tgtcaagaaa ctgagcatca cctgtgacca 004400
004401 acagccagaa agtaactgaa gccccaagac gaacagcttg tgcaaaacta aattctgcct acaacaagag catgaattga 004480
004481 gacgcagatc cttccctagt tgatccttga aatgcttgca gctctatgga caccttgatt gcagccttgt gagaaattct 004560
004561 gaactagagg acctcgtatg ccttacccat aggtcttaca agataatacg tgtttttcaa aaaagtaagt ttggggataa 004640
004641 tttcttatgc agcaatagat aatgaataAT AAAGTAAATA CAGTTTTTTG CTGTTGACTT CAAAAATGTT TAAAGAtttt 004720
004721 actgttatat aattgtacat atttatgggg tacatgtgat attttgatac atgcatacaa tgtgtaatga tcaaactggg 004800
004801 gtaatttgaa tatccatcac ctcaaatgtt atttagtggt attgggaaca ttccaaatct tgtaggtatt ttgaaatata 004880
004881 caaaaagtta ATTTtatata taaatatatg tcatatatta ttaatatatt aataatatat gccatatata tatatgtatg 004960
004961 tataaatgcc atatatatTA ATTACatgta tggcatgttt tcttttatac atttatccac tgataaacac ttaggttcct 005040
005041 tccttacctt ggctattgtg aatagtgctg caataaacat gggagtgtag ataatctctt tgatgcacta gttttctttc 005120
005121 ttttggatgt atacctagca gtgagaatgc aggatcatat ggtagatata tttttagttt tttgaggaac tttcatactg 005200
005201 ttttttacag tggctgtgct tatttacatt cccaccaaca gtgtgtgagt gttcacatcc ttgccagtat ttattatttt 005280
005281 ttgtcctttg ataattttaa ctggagtgaa gtgatataat tgtggttttg atttgcattt ccctaatgat tagtgatgtt 005360
005361 gggtattttt tttaatacct gttggccatt tgtatgtatt cttttatgaa gcatctattt agatcatttg tccatttgta 005440
005441 aatcagatta tttg
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Predicted Small Protein

Name NONHSAT127350_smProtein_4907:5089
Length 61
Molecular weight 6816.0948
Aromaticity 0.166666666667
Instability index 40.7183333333
Isoelectric point 6.68292236328
Runs 6
Runs residual 0.0497340425532
Runs probability 0.0215656833305
Amino acid sequence MSYIINILIIYAIYIYVCINAIYINYMYGMFSFIHLSTDKHLGSFLTLAIVNSAAINMGV
Secondary structure LLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEELLLLLHHHHHHHHHHHHHHHHLLL
PRMN LHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHL
PiMo TTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTo