NONHSAT127467

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT127467

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2137 nt

Genomic location

chr8-:82608603..82610929

Exon number

2

Exons

82608603..82609131,82609324..82610929

Genome context

Sequence
000001 CTTTCGTAAG CAATGACGCC AGCCACTTAG TCCATTGCAA AATAACTGAT GGTCCTGGAT ATTTAATCAT GTTAATGCAG 000080
000081 TCTGTTTCTT AACTAAAGAA AAATGGGTGC CCTTTAAAGT TTTTTTTTTT TTTTTTAAAG ATTAGGAAAC AGGAAGTCAG 000160
000161 AAGAAGCAAA ATTAGACCTC CTAAGGTAGA TGCCTAATGA TTTACCATCA AAATTCAAAA TTTTCCTTGT TTTATGAGAG 000240
000241 GAATGAGCAG GAGCATTGTC TTAGTGGAGA AGCAATCTCT GGTGAAGCTT ACCTGGGCAT TTTTCTGCTA AGACTTTGGC 000320
000321 TGTCTCTAAA CATTCTCATA TTTTTTTTTC TTTTTGTAGA GATAGGTCTT GCTATGTTGC CCAGACTGGT CTTGAACTCC 000400
000401 TGGCCTCAAT GGATCCTCCT GCCTTGGCCA CCAAAAGTGC TGAGACTGCA GGCATGAGCC ACTGTACCCA GCCTCATAAC 000480
000481 ACCTTTATAA TAAGCAGACG TTATTGTTCT TTGGCTCTCC AGAAAGTCAA CAAGAAAAAT GCTTTGAGCA TCCCAAAAAA 000560
000561 TAGTTGCCAT GACCTTGCTT TTGACTAGTC CACTTTTATT TTGACTGGAC CACTTCCACC TCTTGGTAGC TATTGCTCTG 000640
000641 TTTGTGCTTT GTTTTCGGGA TTATTCTGGT AAAGCCATGT TTCATCTCCT GTTACAATTC TTGGAAGAAA TCCTTCAGGA 000720
000721 TCTTGATCCC ACTTGTTTAA AATTTTTATT GAAAGACAAC TGAAATTTTA AGTAGAAAAC CCACCAGGAG AACAAAAGTA 000800
000801 CTCTTGTCTG TAGCTGATCT GGGTGCAATA GTTTCGGTAC CCATCAAGTG GAAAGTTTGC TCAAGTTTAA TTTTTCTGTC 000880
000881 AGCATTGTGT AAGCTGAACC AACTGAGACA TCTATGATGT TGGATATTGT ATTAGTCCAT TCTCACACTG CTATAAAGAA 000960
000961 CTACATGAGG TCGGGCGTGG TGGCTCACGC CTGTAGTCCC AGCACTTTGG GAGGCCGGGA CAGGTGGATC ACCTGAGATC 001040
001041 GGGAGTTCGA GACAAACCTG GCCAACATGG TGAAACCCCA TATCTACTAA AAATACAAAA ATTTGCTGGG CATGATGGCA 001120
001121 AACACCTGTA ATCCCTGCTG CTCACAAGGC TGAGGCAGGA GAATCGCTTG AACCTGGGAG GCGGAGCTTG CAGTGAACCG 001200
001201 AGAGAGCACC ACTGCATTCC AGTCTGGGTG ACAAGAGTGA AACTCTGTCC TCCCAAAAAA AGAATTACCT GAGAGTGCGT 001280
001281 ACTGTATAAA GAAAAGAAGC TTGACTCAGT TCCACAGGCT CTACAGGAAG CATGGCTGGG AGGCTCAGGA AACTTAAAAT 001360
001361 CATGGGAGAA GGGGAAGAAA GCACATCTTC ACATGGCCAG CAGGAGACAG CAAGTGAAGA GGGAGGTGCT ACACACTTTC 001440
001441 AAACGACCAG ATCTTGTGAG AACTCTATCA TGGGACAGCA CTAGGGCGAT GGTGCTAAAC CATCAGAAGC CATGCACATG 001520
001521 ATCCAATCAT CTCCCTCCAT GTCCCTCCTC CAACACTTCC TGTCATTACA CTTCTGCATG AGATTTGGGT GGGGACACAC 001600
001601 AGCCAAACCT CACCATAAAT TTGATGTGTG TTCTTCCTTC AATTTTAGCA GAATTTATGT TTCTCTGATA AAAGAGCTCT 001680
001681 TTTCTAAATG TCTTATCATA GTTAGTGTCC CTCACTAGAT CCTGTTCAGA CATGTTACAA AAAGTTTATT CTGGTGCAAA 001760
001761 AAAAAAATTG AAATTCATAC ACACTTTTTT ATAATACATA TTTTCCATGA AAATTTAGAA GAACACTTAT ATAGATGAAT 001840
001841 GATAGATTAT CAAAGTTTTC CTAGATTTGT CAGGCTTTGT TCTTCACGGT TTTCAAATGA AAGGGCCTGG AGAAACCGAA 001920
001921 GAACTAAAAG GGTTGCAGAA AGAGTCCTAA GGGGAAAGAA AAACTGATAT ACTCACATCT TCGACCTAGG CAACAAAAGT 002000
002001 TATGAGTCAA GATATTTGGT CACATAACTA AAGATAACTT AGGTTTTATG ACATTTTTGT TTTTTGTTTT GTTTTTGTCA 002080
002081 GTTAAAATAG GGAAATTTTA ACTGAAATAT CAATGAACAG TCCCATTCCC TATCCTC
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Predicted Small Protein

Name NONHSAT127467_smProtein_1511:1717
Length 69
Molecular weight 7921.3213
Aromaticity 0.132352941176
Instability index 58.7470588235
Isoelectric point 9.35455322266
Runs 11
Runs residual 0.0212639109698
Runs probability 0.0231809349457
Amino acid sequence MHMIQSSPSMSLLQHFLSLHFCMRFGWGHTAKPHHKFDVCSSFNFSRIYVSLIKELFSKC
LIIVSVPH
Secondary structure LEEEELLLLHHHHHHHHHHHHHHHLLLLLLLLLLLLLLEELLLLHHHHHHHHHHHHHHLL
EEEEELLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHH
HLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTT
Tooooooo