NONHSAT127504
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127504 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1045 nt |
Genomic location |
chr8+:85591033..85592077 |
Exon number |
1 |
Exons |
85591033..85592077 |
Genome context |
|
Sequence |
000001 ATGCTGGATT ACCTCAGTGC TGATCAGTGG AAAATCAAAA AGGATGAGAA GGATGACAAA CACTTTTGAG CTCTGAATGA 000080
000081 AGAGGATACT GCCTTGCTGA AAAATCGTGG TCAGAGCACT TATTCTAGGC AGATTAAGCA GGTTGAGAAT GACATTCAAC 000160 000161 AACTTCTTAA GAAAATTAAT TATCTCAGTA GTGTTAAAGA GTCTGACACT AGCCTGGCCA CCACCAGCAC TCTGGGATTT 000240 000241 GGCTGCAAAT AAGCAAATGC TCCAGGGTGA ACAATGTTTA CAGGTTGCAA GGTGTAGAAA GATAGTAAAT GCTGATTCTG 000320 000321 AGAACTCAAA ATACATTGTC AATGTGGAGC AGATTGCTAA GTTTATGGCA GACCTCAGTG ATCTACTGAC ATTGAGGCAG 000400 000401 GGATGAAATT TGATGTGGAA GAATGTAAGT ATTAAATTCA TATTCCCATA CTTTCTAAGA TTGATCCAAC AATTACCATG 000480 000481 ATGCCAGTGG AGTAAAAACC TGATGTCATA TACAGTGATG TTGTTGGCTG TAGGGAACAG ATTGAGACAT TGTAAGTAGT 000560 000561 TGAAACCCCA CTACTTCATC CAGAGAGATT TGTTAACCTT GGCATGGAGC CTCCCAAGAG TGTGCTCTTT GGTCCACTAG 000640 000641 GTGCAAGACA CTCTGTGCTT AGGTGGTTGC TAAATAGGAC TGATGCTTGC TTCATTGAGT TATTGGATAT TAACTTTTAC 000720 000721 AGAAATATAT CTGCAAAGGG GCTGGAATGA TTCATGAGCT CTTCCCAATG GCCAGAACAA GAAACGCCTG CCTTATCTTC 000800 000801 TTTGATGAAA CTGATGCTAT TGGAAGAGCT CAGTTTGATG ATGGTGCTGG AGGTGACAAT GAAGTACAGA GAAAAATGTG 000880 000881 AGAACTAATT CATCAGTTGG ATGGCTTTGA CCCTCAAGGC AATATTAAGT GCTGATGGCC ACTAACAGAC CTGATACTTT 000960 000961 GGATTCAGCA CTGATGAAGC CAGGGAAATT GGATAGAAAG ATTGAATTTA GTTTACCTGA TCTAGAGGGT CAGACTCACA 001040 001041 TCTTT |
Predicted Small Protein
Name | NONHSAT127504_smProtein_746:880 |
Length | 45 |
Molecular weight | 4988.5751 |
Aromaticity | 0.0909090909091 |
Instability index | 47.3931818182 |
Isoelectric point | 4.70159912109 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.0417280025123 |
Amino acid sequence | MIHELFPMARTRNACLIFFDETDAIGRAQFDDGAGGDNEVQRKM |
Secondary structure | LLLEELLLLLLLLEEEEEELLLHHHHHHHLLLLLLLLHHHHLLL |
PRMN | - |
PiMo | - |