NONHSAT127558

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT127558

Source

NONCODE4.0

Same with

,

Classification

sense

Length

407 nt

Genomic location

chr8-:87486475..87489682

Exon number

3

Exons

87486475..87486587,87487049..87487182,87489523..87489682

Genome context

Sequence
000001 CCATTATTTT AAGATGATTT ACTTCCTGAC TTAAATATAA TATAGCAGTA GATCTTTGAG ACAATGCTTT TTTAATATTG 000080
000081 TCTTCTTTAA TCTTTTTTAT TATGTTTGGG CTCTTTGTGT TTTTGACAGG CCTTAGGCTA CTTTCACAGG GCAGAACAAG 000160
000161 TGGATCCAAA CTTCTACAGC AAAAACTTAC TTCTTTTAGG AAAGACATAC TTGAAACTAC ACAACAAAAA GCTTGCTGCT 000240
000241 TTCTGGCTAA TGAAAGCCAA GGACTATCCA GCACACACAG AGGAGGATAA ACAGATACAG ACAGAAGCTG CTCAGTTGCT 000320
000321 TACAAGTTTC AGTGAGAAGA ATTGAGAACT TTTCAGAGAA GATTTATGAA ATAGCTAATA AACATTGCCT TTTCTTTTAA 000400
000401 TTCTAAA
[back to top]

Predicted Small Protein

Name NONHSAT127558_smProtein_101:289
Length 63
Molecular weight 6836.8322
Aromaticity 0.0806451612903
Instability index 42.3322580645
Isoelectric point 10.051940918
Runs 7
Runs residual 0.0407373271889
Runs probability 0.0301688242865
Amino acid sequence MFGLFVFLTGLRLLSQGRTSGSKLLQQKLTSFRKDILETTQQKACCFLANESQGLSSTHR
GG
Secondary structure LEEEEEEHHHHEELLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL
LL
PRMN -
PiMo -