NONHSAT127571
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127571 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
553 nt |
Genomic location |
chr8+:87777019..87778311 |
Exon number |
2 |
Exons |
87777019..87777104,87777845..87778311 |
Genome context |
|
Sequence |
000001 agatgaggca tatctgaggc acagagaggt taagttgggg actgaagtgt ggctccagaa tctaagtttc taactgccat 000080
000081 gctatGactg accccactgg actcatgact catggactca gctggtcctg tggccctacc cagaagtgga ctcagcacac 000160 000161 gaggaccatt tcccacactc ctgtgatttc atccccaatt attcagcagt accctttcca tagccccttg cccaccaagt 000240 000241 tgtccataaa aaccctagcc tctgagcttt tggggagatg gagttgagta ataactccat ctactgcatg gctggccttg 000320 000321 tgtcaattaa acttttttct ttactgcaat aacatggtct cagtgaactg attttgttca tgcaggaggc aggaaaagcc 000400 000401 ccttgggtga ttacacagtg gttctcaaag tatggacctc caaccagcag catcagcagc atctggatac ttgctagaaa 000480 000481 tggaaattct ctggccctat tccaggcctt ccaagttgga aactttgtga tggggcccag cactctgtgt ttt |
Predicted Small Protein
Name | NONHSAT127571_smProtein_83:286 |
Length | 68 |
Molecular weight | 7485.537 |
Aromaticity | 0.0746268656716 |
Instability index | 41.3925373134 |
Isoelectric point | 9.62506103516 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0342695636813 |
Amino acid sequence | MTDPTGLMTHGLSWSCGPTQKWTQHTRTISHTPVISSPIIQQYPFHSPLPTKLSIKTLAS ELLGRWS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLEEEEEELLEELLLLEEELLLLLLLLLLLLHHHHHH HHHLLLL |
PRMN | - |
PiMo | - |