NONHSAT127610
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127610 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1101 nt |
Genomic location |
chr8-:90608315..90769946 |
Exon number |
2 |
Exons |
90608315..90608741,90769273..90769946 |
Genome context |
|
Sequence |
000001 CAGCGGCGGA CGGCAAGGCG GGGAGAGGGG CAGCCCGCTC GCGGCCCTCC CGCCTGGCTC TCGCCTCGGC CTGCGGCCGG 000080
000081 GATCCTCCGC CCGGGTCGCG CAGCGGAGGC CGAGGGCTGG GACGGGCGGC TGGGAAGTGG GAAAGGGAGC TCCTTTTGTC 000160 000161 TTCTCTTCCC ATCCCCCAGG TTTGGGAAAG TTTTCCTTTT GGGAAAGCCC CTCTCTTCAG CCTGCTGGCG GGTGTCGGAT 000240 000241 TGGTTAGCGA CCACCGGCCC CCGCCTCCCC CAACAGGATT CTCCTTTGGG CCACAGGTCT TCCGGAAGTT GCCAAACCCC 000320 000321 GGTAGCGGCA GCGTCCGGCT GGGGGCTTTA TTAGGGGGCA CCGGGGTCTG CTTTCCGACT CCCTTCCGAC TCCGCGCCTG 000400 000401 CGCAGGAAGC GATTTGGGGA GTGTTGTGAA TTCCGAGGGC TCCACACTTA AGAGGTTGTA CACTCACCTG TCTACCTGGA 000480 000481 CTCCAATTTC CATATTTCCA GCCACTTGAG GACTGAGAGG TGGATGATAA ACCCTGTCAT AGTGGAGCAA GTTCAGGTGT 000560 000561 TTAACCGCTG TTATGGGGGA TCTGCCTTTT CTCCCTCTTC TTTCTTACTT CCATAAGTAT GTATGTGCAG AGATTGAAAA 000640 000641 ATAACCTTGA GAGAGTCCAT CCATCTAACT CCAGatcttg acatctatgg ttcttcattg ttcaggacac agctgaagta 000720 000721 ttacctttcc caagagatct tacatgacaa taaccacccc tgtcctatgt aagtactaca tacttcagtt gctttcacac 000800 000801 atcaccctgt tttactgtgt ttattgcagt tgtcattgtg tgaaatggtc ttgtttcacc attattgtat ttTGCCAAGT 000880 000881 AGAGCACTAT CCAACAGCAA GATGACAGTG TTGAAGTTTA CTTAATGTTT CCACAATTCA TTGCATCATT TTAACTACAT 000960 000961 GGATATCTTA AGTCCTCCAG GTCTACTTCC TGTCCTTAAC AGTGAACTGT ATTATGACAT CATGCAGAGC CCATGGTGCC 001040 001041 AGCAGTAGCC CTGCTGGTAA TGCTTGCTTA TGATTGCCGA ATTGGGGGTC AGCCTGTCCT G |
Predicted Small Protein
Name | NONHSAT127610_smProtein_743:904 |
Length | 54 |
Molecular weight | 6284.5241 |
Aromaticity | 0.169811320755 |
Instability index | 57.8473584906 |
Isoelectric point | 8.20452880859 |
Runs | 8 |
Runs residual | 0.00931891394386 |
Runs probability | 0.0274686451158 |
Amino acid sequence | MTITTPVLCKYYILQLLSHITLFYCVYCSCHCVKWSCFTIIVFCQVEHYPTAR |
Secondary structure | LEELLHHHHHHHHHHHHHHHEEEEEEEELLEEEEEEEEEEEEEEEEEELLLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTToooooooooooooooo |