NONHSAT128063
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128063 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
539 nt |
Genomic location |
chr8-:102540951..102541797 |
Exon number |
2 |
Exons |
102540951..102541371,102541680..102541797 |
Genome context |
|
Sequence |
000001 GATGGCGACC AAGACGGTGG TGCACCATAA GTGGAAGATT GCTGAACTAA AGCAAGAATG TCTTCCTTGT GGTTTGGAGA 000080
000081 CCAAGGAAAT GAAACAAGAT GCCATCAAAA GGCTCCAGGA AGATGTACTG GGAGATGAAA CAGAGGAAGA AGAAACAAAG 000160 000161 CCCCATAGAA ATCCCTGTCA AAGAGGAAGA ACTCCCTGAA AAAACTGTTG ACGTGGAAGC AGAGAAGAAA GTGGTAAAAA 000240 000241 TTACATCTGA AATACCACAG GGAGAGAGAA TGCAGAAGAG GGCTGAACAA GTCCATGTAC CCGTGAGCTT GTAAAGTAAG 000320 000321 AAAACTGCCC GGGCAGCTAG GTTTGGGACT TCTTCAGTTT CAACAAAAGG TCTGTCATCT AACAACAAAC CTATCATGAA 000400 000401 CCTGGATAAG CTAAAGGAAA GAGCTCAAAG ATTTGGTTTG AATGGCTCTT CAATCTCCAG AAAGTCTGAA GATGATGAGA 000480 000481 AACTGAAAAG GAGGAAGGAC TGATTTGGGA TTATCACTGG TTCAGCTGGA ACCAGAAGG |
Predicted Small Protein
Name | NONHSAT128063_smProtein_98:313 |
Length | 72 |
Molecular weight | 8316.657 |
Aromaticity | 0.0281690140845 |
Instability index | 83.2887323944 |
Isoelectric point | 9.47552490234 |
Runs | 12 |
Runs residual | 0.0204595997035 |
Runs probability | 0.0471280103634 |
Amino acid sequence | MPSKGSRKMYWEMKQRKKKQSPIEIPVKEEELPEKTVDVEAEKKVVKITSEIPQGERMQK RAEQVHVPVSL |
Secondary structure | LLLLLLHHHHHHHHHHHLLLLLEEELLLLLLLLLLLLLLHHHEEEEEEEELLLLLHHHHH HHHLLEEELLL |
PRMN | - |
PiMo | - |