NONHSAT128109
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128109 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
999 nt |
Genomic location |
chr8+:103807041..103808039 |
Exon number |
1 |
Exons |
103807041..103808039 |
Genome context |
|
Sequence |
000001 GGCCAGGCCA GGGCTCCATG ACTGCTGCTC TGAAGCAACA AAGCCCCCTA CTCCACTTTC ATCTTGCCAG GGCAGAGGGT 000080
000081 GGGCTACAGC GGGATCTGGC TTGTTGCTGG GAGACACCAT CACTGAAGGT CCGCGATTAT CATTGCAACT GTTCATGTTC 000160 000161 Ctttaaaaaa ttaaattaaa aaaaaaaCCC AACATGAGAA ATCTCATGCT TGTCAGAGTC GTCCTCCCCC GCTGTCGGCT 000240 000241 CCCATTATGA ATCCGTGGCA TTTTCTGCTG AGAGTTAATT ACATGTTGTG TGAAAGATAC CAGGCTTCCT TTAAAAATTT 000320 000321 TTTCTCCTGG ATGGGTTTTG ACCCCGTCAG CTGCCTCCCT CTGCTTCCTC CCTGTGCAGC AGGAAAGAAG GGCATGCTTG 000400 000401 GGGGAGGCAC AGGCCTGATG TCCCGGCCCT CTGCTCCTCA GAGCCCGCGT TCCTCCCGCT GATTGCTCAA GGCCTCCCTG 000480 000481 AACCCAGGCA GTTGTCACCC AGCGCCCGGA GAGCCCGCTC CTGCCAGAGC GCGGGGATCA TGACAAAGCA CAAATGGAGG 000560 000561 TGCTATTTAA GGTGCCAAGC ACTTAGCCCT CCACAGGCTG TTTCCTCTCA CCCTCCTCCC TCACAAAAAG GGGGGTCAGG 000640 000641 TGGAGGGAGG GGTGCAAATG GCTTCCTGAA GCCATCCCTG TGAAGGCTCA AAAGGGAATG TGACCCCTCC AGGAGGCGAA 000720 000721 AGGCAGAGCC TCCCAGTTGC TGGTTCTTTT TTTCTGCTTG CTCCCACACA TAGACAAAAA TTCTCATTCT CGAGATGGCT 000800 000801 CATCTTTTCT CCTAAGAGGC GATGACCCGC TCCGGAAGCA AGTGTGGACT AATACCACGA GTTATTGCCT CTCTGCAGTG 000880 000881 TTGAATTTCA CCTCTTTAAG AGATGGCCAG TGGCACAGCT GTTGGGACCT CTCAGAGCAC GTTACAACAC CCCTTGCTCT 000960 000961 GACAAGTCAC AGCGTCTCGG AGCTGGAAGG GCCTTCTCA |
Predicted Small Protein
Name | NONHSAT128109_smProtein_17:178 |
Length | 54 |
Molecular weight | 6020.9476 |
Aromaticity | 0.0754716981132 |
Instability index | 55.5509433962 |
Isoelectric point | 8.73626708984 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0214037566979 |
Amino acid sequence | MTAALKQQSPLLHFHLARAEGGLQRDLACCWETPSLKVRDYHCNCSCSFKKLN |
Secondary structure | LHHHHHHLLLHHHHHHHHHHLLLLHHHHHHLLLLLLLLLLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |