NONHSAT128114
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128114 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
839 nt |
Genomic location |
chr8-:103846463..103847703 |
Exon number |
2 |
Exons |
103846463..103846491,103846894..103847703 |
Genome context |
|
Sequence |
000001 TTGTACATAA ATAGGTGGTA GTCTTTTAAA CAAAGAATGG GATCATGCTG TGCCTTACAC AATAGATAAC ATTCCATGTC 000080
000081 AGTCTAGTTT TAAGTTTTAA TTTAAGTCAA CATAAAAATT AATGAAGTAC TATCTCGAAT AGATGAAGGG AAAAGAAGAA 000160 000161 TGGACtttac gggtacagtt ctatggattt tagtacttgt gtgaccactg ccacaatcag gaAGTATTCT ATTCTGAAAC 000240 000241 TTTATCACTA GTAATACTAG TGAATAATAG TAATGCTGTT ACTCAGCTTG ATTAATGTTC ATTTTTATTT ATTTCACAAC 000320 000321 AGACACATTT TTGTATTTGG TTGGGTAAAA TTGAATGTTC AGTTTTATGC TCAACTGAAT GTGATACGAT TTGGTAGTGC 000400 000401 TTGTTACTTC ACTATATAAA CATAAAAGTG CCACATATAC ATAAAAGCAC ACCTTATTGT ATAACCGTGG AACAGTACTG 000480 000481 ATAATTGACT TATTGTTAAG AATTTTTGTT TATAGAATTA CAGTTTTATC TTGGCATTGC CTTTTCTATA AAGCTGGTAC 000560 000561 TGTAACTTTT GGGTAATTAG AAGCTAATGC TTCTAATACT TTAAATATTT GGTAAAGTTA ATGGGGATAC TTAATGGTAT 000640 000641 GAATATGATG AGTGACAGTT GAAAGAAATT ACAGGAGGTG TCTCTACAAC TTTCTGCTCC TTTAAATTTA GTATTCTATG 000720 000721 TGTTTCAGAT TTCATGTTTC GAGTGCTTGC AAAGAATCTC AAGTATATGT ACATGCTCTA TCTGATGCTC GATGTGTGTT 000800 000801 TGACATGGCT GGAGAAATTG GCTTTACGAT GAACATGTT |
Predicted Small Protein
Name | NONHSAT128114_smProtein_272:418 |
Length | 49 |
Molecular weight | 5794.8362 |
Aromaticity | 0.229166666667 |
Instability index | 50.265 |
Isoelectric point | 9.62493896484 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.0454474081925 |
Amino acid sequence | MLLLSLINVHFYLFHNRHIFVFGWVKLNVQFYAQLNVIRFGSACYFTI |
Secondary structure | LHHHHHHHHHHHHHLLLEEEEEEEEELLHHHHHHHHHHHHLLEEEEEL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii |