NONHSAT128281
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128281 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
943 nt |
Genomic location |
chr8+:109664602..109665544 |
Exon number |
1 |
Exons |
109664602..109665544 |
Genome context |
|
Sequence |
000001 ACATGGACTG GGAATTAGAA GGGAGTGCTT AGAACACAGT CACCTGGAAT ATCTGAAATA TCTGAATACC TAAAATATCT 000080
000081 GAGAGCTTTC AGTTTCTGCA GATTGATGCA GAATGCAAAT GCCAGGAGGG AGAGACCCTG ACCACCAGAG TGCAGGATGG 000160 000161 TGCTCATTCT CAAACAATTT GGTTTTCTGG GTATCATAAG AAAAATATCC AGAGAAAACA GAGACACTGG GAAAAGATAG 000240 000241 TTGCAGTAAA GAAGGCAAAA GAAAGCAAGA AAAAGAAAGA AGAAAAGCCA ATTGTGCAGA AAATCCAGGA ATCTGCCCCT 000320 000321 AACACAGCAA ATATTTTCTG AGATCTCTAA GCAAAGAGAT TCTTTTGGAA GACAAACACT CAGGACAAAG GCTGTGTATC 000400 000401 AATTTGAGTA TGACCCACCC CATGTCAAAG AAGGAATTGA GTAGACTGGC TGGACAGATA TGAAGGTTGT ATGGTTCAGA 000480 000481 TGAAATCTAA TAGGCCATTT TGGATCTGCC TCACTGGATT CACAGTAGAC AGTGCCCTGT GTGAAGAGCG AAGATGAATT 000560 000561 TTCTAGCGAC TTGCTAGACA TAAAAGAAGA CTTCTTTTAG TTTATTTCCT CTGGAAAGCC TTGTGTTCCC GACTCCTAAC 000640 000641 TTAGAATACA CTCTTGAAGA TGTTGATGTA AACGAAGTTT GTATCTTTGA TGGACTTGTG GATGAAAGCA TTCAGAAGAA 000720 000721 GGTGACATTT CAAAAGGCCC AGGAATACTC TTTCAGGACA GCCCACTTGT CTGTCATTCC AGGGATACAT GACCAGACAC 000800 000801 CAGAGTGGAA ATAACTCTCA TTTAGGGATG CTGGCCATCA ATCAAGTATT TGATATTCTG TCCACTTGAG ACTCTTAACT 000880 000881 GGCCTGAAGC ATTGAAGACA GGAATTTCTT CCAAAAAAGT TATATTCTTC AGAGCACAGT GGG |
Predicted Small Protein
Name | NONHSAT128281_smProtein_470:556 |
Length | 29 |
Molecular weight | 3318.8688 |
Aromaticity | 0.107142857143 |
Instability index | 60.8571428571 |
Isoelectric point | 7.82330322266 |
Runs | 7 |
Runs residual | 0.0467806841046 |
Runs probability | 0.0459282812225 |
Amino acid sequence | MVQMKSNRPFWICLTGFTVDSALCEERR |
Secondary structure | LEEELLLLLEEEEELLLLLLHHHHLLLL |
PRMN | - |
PiMo | - |