NONHSAT128288

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT128288

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

1692 nt

Genomic location

chr8+:110310827..110328791

Exon number

2

Exons

110310827..110311158,110327432..110328791

Genome context

Sequence
000001 ATGTAAATAA AAGGCATGTA AGAGAAAGGG AGACAAGTAT TTGTCATAAA TATAACCCAG GGCTAATATG TATAACATAA 000080
000081 AAAAAGCCCT TAAAACTTAA CAAGAAACAT GATTATTTAA AATGTTTAGG GGGATGGGCA GATCATGACA GACGGGAGGC 000160
000161 AGGACTAAAT TGCAGCTCCA ACTCTGATGG ACAGAGCAGC CTGTGGAGCC TCGCATCATG ATTTTTTGCT CCAGAATGAC 000240
000241 TGCAGGAATA AATCAGGAAA GCCGAGAGAA CCCGCAGACC CTCTGAAGGA AGTGGATTGC TCCTACAGGA CCCGGGAGAC 000320
000321 ACCCCAAATA CTGCATTGCA GCTCAAAAAA TGTTACTCCG AAATAATGCC ACTTCAACAT GAAGCAGCCT CAAGGTCTTT 000400
000401 CTGGCCTCCC CTCCCTTCCT GTTTCTCCCA AGCACAGGAT GAAGCTATTC TCTGAAGTTC CTTCATCTAC CTATAAACTG 000480
000481 GACCTGCCAA AGAGAAACAC AATTGCTTTC CCTGAAATTT CATTAACCAG AGAAGATTAA AACTTCTATC ACAGAGGAAG 000560
000561 AGGCTGAAAA TTAAACACCC CACCTACAGC CCAGATGAAC TTAGTCACAA ACCATTGTCT GCTCTCCATC CCATTCAATT 000640
000641 TCCAAAGAAA AGTATTAACT AATCATTGTC TGAGCATCAG GCCCATTCAT TCATTTCCCC CTAAAGATCA TTTGCTATCC 000720
000721 CGCATGTCCC CCATGTCCCC TACTGATCAA GCATAAGAAG GGTATGAATA AGGGTATATA AGCATCTGTA CCCCACTGGG 000800
000801 TTACTGGGTA GTCATTTTCC TGGATTCTGC CATGTACACA TGTTAAAATA TATTTATATG CCTTTTTCTC ATGTTAATCT 000880
000881 GCCGTTTGTC AACAGATTTT CAGCAAACCT TCTAAGAATA AAGGGGACAC TTTGCCTTCG TCTCTACACA GGTAAGTAAG 000960
000961 TGGTCCCCTA ATAATTAACT CAACTGTGAA AACAAGCTGA CATTCAGGCC TAGAGAGGAA CATACTGACA TAAAACTGAG 001040
001041 CTCCTCTAAC AAATAGTTGT AACATGTCAC TCCAAGATGC AACCTCACAC ATATATTCTT ACAAATGAAA TCCAGTAACT 001120
001121 GCCCCTTAGA CCTTTAAGTA CAAATTAAAG AGGCACTATA AGATGACACT CTTTTAGTAA CAGAAACAAA TTAGCTTTTC 001200
001201 AGGTAAATAC AAAACAAATT ATTACAGAAA TAATTTCCTA AATATTAAGA AACGGAACAC ATTACTTTAA AATAAGCCAT 001280
001281 AATATATAAA ATAAGGATGT ATTAAAAAAC CAAAGTTTAA ACACATTTTT GCTTTCCCAA GGCATTTTCT ACTTCCTTAG 001360
001361 CACACTTCTT TCCGAGGGAC ATTTCCCTAA AATTAAGGAC TGTAAACCTA CAAGTTAAAC TTTTTTGTAA GGAGAGTATT 001440
001441 CTGTCTTTAT AAACCAGTAT GTAGACCTGC TGCCACCTGT TGGCTCCAGA CAGTCTGAAG ACCTAGCAAC CTATGGCTTT 001520
001521 CAAGTGTTGG GTCCCATAGC ATTCACTTTT ACTACAACAG TTCAGGTTTA ACAAAGGTGG TCATTTGTAC ATCAGTCACA 001600
001601 GAAAAGGAGC CTGTCTAGGA TTTGTGCACG TGTGCCTTTG ATGAAAACAA AAGAAAACAA AAAAAATTAT TAAACAATAA 001680
001681 AATGGATATT GG
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Predicted Small Protein

Name NONHSAT128288_smProtein_839:958
Length 40
Molecular weight 4619.566
Aromaticity 0.153846153846
Instability index 46.6692307692
Isoelectric point 10.2977905273
Runs 7
Runs residual 0.0107466063348
Runs probability 0.0442627501452
Amino acid sequence MLKYIYMPFSHVNLPFVNRFSANLLRIKGTLCLRLYTGK
Secondary structure LLEEEEELLLLLLLLHHHHHHHHHHHHHLLEEEEEELLL
PRMN -
PiMo -