NONHSAT128383

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT128383

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2799 nt

Genomic location

chr8-:117947899..117950697

Exon number

1

Exons

117947899..117950697

Genome context

Sequence
000001 TGCACCGCCC ACTGGAAGGC GCGCGTCAGC CGTCGTCTGA GGTCCTCCAG CAGCGGGCTG GCGGCGAGGG CCTCCTCCTG 000080
000081 GATGTCCGTG CTCCTGCCGT CCCCGAAGAA GTCGCACGCG GGACGAGGTG GGAACCAAAG CTCCGCTCTA CCTGGGAGTC 000160
000161 CCTGGAGCCC CTGGGAAATT CTCTCTCTGC AGCGGCGGAA GTCCCCGGGG CCCATCGCGG AGACGCCTGG TCACTGCTCT 000240
000241 ACCGCTGCTG CTGAAAGATG AGTTTCTAAG TTTGATGTTT AGGGCGGGGT CAGGGCGGGG GCGGAGGTAA TTCAAGGACC 000320
000321 CTTGCCAAGT GGGATGCTGC AACTGCCCCG CCATTCAGAG ACGCTCCTTT GCTCCCAGTC CCATCTTAGC CCTCCATTAG 000400
000401 CGACAGAGGA AGGAGGCGGT TCCCATAACT CCAGGAGAAG TTTAAGCTGA GTCGCTTTTT TCTGCTGCTT GCATTGAAAG 000480
000481 GAAGTCTTTC TAAGGAGAAG GCTTGGTAAC TGAGCAGTCA GCCTATGTAA GTGGAAGTTG AGGTACAGGT GGAAGGTTTA 000560
000561 TGACCAAAGG TTAGAATATT TCAACCCAAA GCCTTCCTGG TTGCCTTGAT CGTCTAATAC GTCATTCCTT AAAAACAATT 000640
000641 TTTTTTCTTC CTACTCTGCC AGGCACTTTG CCAAGTTTGG GGAATGCAAA GGCTTAATTA GACCCCTCAC CTTTCCCCAG 000720
000721 GTATTGCCCG CAGTCAAGGG GGAGAGCCTT GGCCCTGCTT GCTAGTTAGA ATGTACCTTC TACAGGTTCA GTAAGGCATA 000800
000801 CCTGGAAGTC TGAGTCTCCA TGCTCCTTTC TATTTTGACT CCTGTCTGCC ATGTCCACGT TTATGAAGGG GTTAAAATGA 000880
000881 AAAATCAAAA TTCCCCTTAG CCCAAAGTGT GTGTGTTTAA TTCCCAACTA ATAAGGTTTG GCTCTGTGTC ATCACCAAAT 000960
000961 TCCAGTGGAA TTGTAATCCC CAGTGTTGGA GATGAAGCCT GGTGGGAGGT GATTGGATCA TGGAGGTAGA GTTCTCATGA 001040
001041 ATGGGTTTAG CCCCATTCCC GCCTGGTACT TTATAGTGAA TGAGTTCTTA CCAGATCTGG TTGTTTAAAG TGTATGGCAC 001120
001121 CTCCTCTCTC TCTCTCACTC CTGCTCTGCC ATGTAAGACA CTTGCTCTCG CTTTGCCTTC CACTATGAGT AAAAGCTCCC 001200
001201 TGAGGCCTCC CCAGAAGCAG ATGCTGCCAT GCTTTCTGTA TAGCATACAG AACCATGAGC CAATTAAACC TCTTTTCTTT 001280
001281 CCAAATTACC CAGTCTCCGG TATTTCTTTA TAGCAGTGAG AGGACAGACT AATACACCAA CTCCAGGTAA TCATGTGCCA 001360
001361 ATATTACCTG TATATCCTTT ATCAAAGAAC ATATTCTGCC TCTTTTTGAT CTAATAGGGA ATTTCTAAAA AGGAGTGAAC 001440
001441 AATCAAAACT TTTGTATGAT CAAAGAATGC AATTACAAAA AAAAACAAAA CATAGTTTAG ACACAACTCT CATCTTATTC 001520
001521 ATCATTCATT CATTCATTCA TTCAAAAGTT ACAAGTCACT TGCAATGTTC CAGGGTCCAT GGTAGGCATT GAAGGCAATA 001600
001601 ACAACTGATT TTTATTCATG CTTAGTATGT GCCAGGCAAT TTTTATGTAT TAATCTTCAC AGCAACCTTG TGAGGTAAGT 001680
001681 ACTATTAGTT TCTGCATTTT ACAATTGAGG AAACTAAGGC AAGAGATTAA GACGTACACC AAAGATCTCA AAGCTGGTAA 001760
001761 GGGATCCACT GGAAATTTGC ACCTAGGAAG TCTGGCTTGT GCTCCAAACC ACTGGGATAC ACCCTGGATA CGCTTTATCT 001840
001841 CCCAAAGAGG AAGAGAGTTG CTCAGTTTAT ATGTTGCATG AGTGAGTGAG TAAGAGTGAA TAAGTGTTTA AATTCACTAT 001920
001921 GTTCATAAAA TTCGGCTCTA TTGAAATGGC TTAAGGCTCA ACTGGATAAG GAACAATACA GGTTACTCAG CCTGTGCAGA 002000
002001 TAATCTACTA AATTGAACAG CTTGCAATAG TTTACAACCC AAGCACAGTA AAATTCCTAC CATTGTATAT TGCTTCATAA 002080
002081 AGATTCCCTA GAAACATCTG AAGATGTGTT GTCTTGGTAG AAATTATAAA AATCCATGTG GTCTGCCATG CAGCAATGGA 002160
002161 GTGTGAATTT AGGGTTTTTT GTTTGTTGGT TGGTGATAGG TTGATGGGGC TTGAAAACCA CCACTAGTCA ATGTACAATA 002240
002241 TAAACGTTTA AAATGAATTT TTTGCTATGA TTTTTCACTT CCATTTCCAG ATCATTTACT TCAACAAGAA TTTCAGTTAA 002320
002321 GTTCAATTTA ACTCAACAGT GAATGGCGCA TGTTCAGTGT TAAGAATTGT GCCATATGAG GGAGATACAA AGATGAATAA 002400
002401 GGCATAGTTT TTGTCCCCCA GAAGCTTAAA ACCTGAGGAA GCAAATTTAT TGATTCATTC ATTTAACAAT ATTTATTTAA 002480
002481 TGTCTTATTA TGTACCAAGC ATTACACAAG GTGCTCAAGC TACAATGGCA AACCAAGGAG ACAAAATGTT TTTTTAAAAT 002560
002561 AAACTGGTTT ACCACAAATT AATAATTTTC CTCTATAGGT TAATTTTTCA GTTGTGGTAC ACCTTGAATT TTACAATTTT 002640
002641 TTTTCTTTCT CTTACACAGG CAAAGCAAAT TGAAGAATTG GAGCACTGAA TATAACATCC ACAGACATTT GAATTAGAAA 002720
002721 ATGTATTAAT TATTTATTGC TGCATAACAA ATTACTCCAA AATTCAATGG TTTAAAAAAA TAAACATTTA TTTTCTCTG
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Predicted Small Protein

Name NONHSAT128383_smProtein_1079:1312
Length 78
Molecular weight 8606.1246
Aromaticity 0.116883116883
Instability index 53.6961038961
Isoelectric point 9.56695556641
Runs 9
Runs residual 0.0191981931112
Runs probability 0.0395395395395
Amino acid sequence MSSYQIWLFKVYGTSSLSLTPALPCKTLALALPSTMSKSSLRPPQKQMLPCFLYSIQNHE
PIKPLFFPNYPVSGISL
Secondary structure LLLEEEEEEEEELLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLHHHLLLHHHHHHLLLL
LLLLLLLLLLLLLLLLL
PRMN -
PiMo -