NONHSAT128554

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT128554

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

8304 nt

Genomic location

chr8+:124480114..124488417

Exon number

1

Exons

124480114..124488417

Genome context

Sequence
000001 caagtagcta gggtcacagg cgccagccac cactccccgc taattttgta tttttagtag agacagggtt tgccatgttg 000080
000081 gtcaggctgg tctcgaactc ctgacctcaa gtgatccacc cgccttcacc tcccaaagtg ctggAGGTTC AGGATCTCTA 000160
000161 AATGAGAGGT AAACAAACTG AAGCAGGAGG CCAGATCAAG GAGATGCCCA CCATGATGTC AGGAGGTGAG TTGGGAAAGG 000240
000241 GCCTCAGGAG ATAGGGATTC TTGCGTGGCC CCCAAAGGGG GTAGTGGGGT AGGGAATAAG CTTCCTCCTA CCCTAAGCAC 000320
000321 CAATAAATTC AAAACTTTAT TTATGTAttt atctatttat ggtaaaaata taacataaaa ctcactatct taaagtgtac 000400
000401 agtagtgtta agtatatttg catcatcatg ccacagatct ccagaagttt tcatcttgca aatggaaact ctgtactcat 000480
000481 caaacaactc cccattttcc tctctccata tccccccact aactgccatt ctactttctg tttctatcag tttaactact 000560
000561 ttagatacct cgtatacgtg gaatcataaa gcatttatct gcattatttt acttagctta atgtcctcca gtttcattca 000640
000641 tgttatagtg tatgatagga ttttcttatt ttgaaggact gaataatatt ccattgtatg tatatatcac atttgcttta 000720
000721 tcattttttc catcactgaa catttaggtt ccatccacct cttggctatt gtgaataata ctgcaagcga catagatgtg 000800
000801 caaatatctc tgtgagatct tgttttcagt tcttttggat atatatcaag gaatgggatt gctggtcata tagttgctgg 000880
000881 taattctatt tttaattttt tgaggaacct ccattctgtt ttccatgggc tctaccattt tacattccac aaacagtgca 000960
000961 caagtgtttt aatttcttta tgtctttacc agcaagcact tgttatacag tctcccttct ttcttttcat agtgggcatc 001040
001041 ctaatgggag tgaggtgata tctccttgtg gttttcagtt gcatttttct gatgattagt aatgcgaaca tcttttcatg 001120
001121 tgcttgttgg ccatttgtat atcacttttg gagacatgtc tgttcaagta ctttgcccgt tttttaattg ggttatttga 001200
001201 tttttgttgt tgagttgagg gaattcttta tatattctag atattagtcc cttctcagat gtattatatg agcatatttt 001280
001281 cttcaattcc ataagttgcc ttttcactat attgattgta tcttttggtg cacaaaagtt tttaagtttg atataattcc 001360
001361 atttgtctac ttttgctttt tgttgcctat gcatttagtg tcataccaag aaatcattgG AAATATGTTT TTTCATTTGT 001440
001441 TTAAGCCTGT AGGAGGAAAT ACGGTTTGAG TGAACTTTAA CATCTTGGAA AAGTAAGCCT TGGTCAAGCT TACAGACAAG 001520
001521 AGACTAGGCT GGTTATTCAT CCTGTGAAAC AGCCCTACAA ATTTACCTAC ACCATGGAAT CCAAGATCCC ACTGATAATG 001600
001601 TGAACTTACT CCTTTTTGTT TGTCTTCTCC CTTCTAATGT TAATTTTTTT AACTGCAGGA AAAATAACAA AATAACAGAA 001680
001681 TTCTTCTTTT ATAAGATAGA TTTGGGAGCA TGTACTGATC TTTTGAGTGA GGTGGAGAGG TCAAAATAAA AATACTAAAA 001760
001761 TGTGAATAAA ACTTTGAGAC TTAGATGGAG ACCTAGTTAA ACCTTTTCTT CAAATGCCAT CAATGCCAAA GAGCAGCAGT 001840
001841 TGTTTTACTA attcattcac caaaagtgat tatcaaacgt ctactatgtt ctgggcacta actagccaag gcaatatagg 001920
001921 tgtgtataag aggcaagtct ctgctgtcTG TGAGTCTATG CAGAATCTCG TCTTCCGTTA GAAGCATCAA CAAACATGTA 002000
002001 TTGCCTGCCC TCCCTCTGCT AGAAGTTTGG GGAGACAtgt tatggactaa atgtttgtgt cccccaaaat gtacatgttg 002080
002081 aagccttaac gcccaatgtg atggtatttg gaagtgaggc ttttgggagg taattagata taaatgaggt catgaaggtg 002160
002161 tggtccccat gatgggatta gtggccttat aagaaaagag acaagagagg ttcttctctt tttctgccac atgaggacac 002240
002241 agtaagaagg cagctatcta caagccaaga agagggtcct cactaggaac tgaagcctgc tggaccttga ttttgaaatt 002320
002321 tccaggcttc agagctggga ttcctgtgtt taagccacca cccagtctat ggtattttgt atggcagccg aaacagacta 002400
002401 atacaAGGCA TAAGGGACAG TGAGATGCTG TTCATCCTCT CAAGGGTTCG TGAACTTGTT ACCGTGGCCT CCGCAGTCCC 002480
002481 TGTGTTCACT TATCTTTGCT AAGGGCAAAT CACTGATGAG ATGGACGCAT TTTATAACTG GAGAATAAAA GGGATGAGGC 002560
002561 CCTACAGGCT GAGGGTTACA ACCAGGTGTC TGAAGGAGTC AGTGTCCCAA AGAGTGAGAA TAGTGGAGTG TGTAAGTGGA 002640
002641 GAATAACCAG GTAGGTGCTT AAAAGTGAAC CTGTGTTGAC TGTATTCACT TATTTCATAA GACAACTTTT GGAGGCCAGA 002720
002721 CACACCACCT TTAAAAAGTA ATtgtataag tgtcctagtg ctgtgcatga agtcccataa actgggtgct ttttaaacac 002800
002801 ccagttgttt ttacaataga agtttatttt cccacagttc tggaggctgg aagtccaaaa tcaaggtgtc atcaagccta 002880
002881 tgcttcattt gaaaactaga ggggagaatc ctttcttgcc tcttttagct tctggtgttt ggtggtaatc cttggtgttt 002960
002961 cttggcttgt agatgcttca ctcccatccc tgcctccaaa gtcatatcgt catcctctcc ctgtgtgttt ctccttcctt 003040
003041 ttttcttttt tttttttctt tttttgagac aggatagcac gctgttgctc aggctggagt gcagtggcat gatcatagct 003120
003121 cactgcaacc ttgacttcct gggctcaggt gatcctcctg cctcagcctc ccaagtagct gggactacag gcatgcacca 003200
003201 ccatgcctgg caaattaaaa aaagattttt tttttttggt agagacgggg tcttgttatg ttgcccaggc tggtctcgaa 003280
003281 ctgctgggct caatcagtcc tcctgccttg gcctcccaaa gtgctgagat tactggtgtg agccaccatg ccttgcctct 003360
003361 gcttcctctt ataaggacat cagtcatacc aggttaaagg ctcactctac tccactgtga cctcatctca aataaactaa 003440
003441 ttacatctgc aacaacatga tttccaagta aggtcacatt ctgtggtact gggtattagg actttgttgt agtcagggtt 003520
003521 ctccagagaa acagagccaa taggatggtt ccgtctctat agatagaaat aaatttatta taaggagttg gctcacatga 003600
003601 ttatggaggc tggaaagtcc caagatctgc atagtgaatc aacaagctgg agacccagtg gtttagttcc aggctatgtc 003680
003681 caaagacctg agatccagga gagctaatgg tatagtttca gtctgaagtc cagcaggctt gagacccagg gagagctgat 003760
003761 gtttcagttc aagtacaaag acaggaaaaa attaatgtcc cagctcaaag gcagtcaagg agaaactctc tcttactcaa 003840
003841 gggagaatga gctttttatt ctatttagac cttcaatgat tggatgaggg ccacccacat tagggagggt aatctggttt 003920
003921 actctgtcta ccaatataag tgttactctc atccaaaaac actctcacac aaacccccag gataatgttt gattaaatat 004000
004001 ctgggcaccc catgacccag ttaagttgac acgtaaaatt aaccatcaca ctttaaaata tctttttggg aagcacaatt 004080
004081 caacccataa AAGTAATAAT CATGCCTAGA GAACTTTTTT AGTTGAAGAG ATAGAAAGTT TAATTCAAAT CTGTACCTGT 004160
004161 TGCTTTGTAC TGTTATTTGA TAGGGGTCTT ACCCCACTCC TATCCATCAA GGCTGGCAGA GGCTATTTTC CAGGATTTTA 004240
004241 GGGTTGCTGG CAGCTGGGCA GTGACTCAGG AGAGTTGTGA GTGGGGACAG AAAGGAAGGA AGTATGCCAA ACAGTGCTAA 004320
004321 AAAATATCCA AAGCTAAGAA ATGTGTAATT AGCCCTGACC TCCTTTGCCC TTCCTCCTTA CTAAAGCAGA GTGGGTGAAA 004400
004401 TGGCTCATGG GTTATTAATT GCCCTCTGCT GGTCACTTTA CAGGCATGGC TTCCCATTTG CTTACTTTAt tttctaggga 004480
004481 tgtcagcaaa ttaccacaaa cttgatgact taaagcaaca gtaatatatt gtctcatagt tctggaagtt agaagtctaa 004560
004561 aatcaaggtg tcacagggtc catgctccat ctgaagttgt ccagggactg aagtgtccaa tccttccttg cctatcccta 004640
004641 gtttctggtg gttcctggca atcctggtgt tccttggctt gcagctggct ccccacaata tctgcctcca ttttacatgg 004720
004721 ccttccctct gtttctctgt gtgccctctc ttataaaaac agcagtcatt ggatttaagg tccaccataa tccagcatga 004800
004801 ctttatttta agttaattac atttgcagaa accctgtttc caaacatgtc acattctaaa gttctggata gacatgcatt 004880
004881 ttgagggaga tgctattcaa cccCCTATAC TAAAACTCTT TTTCTGTGGA AGAGAAAGAG GCAGGGAGAG TAACTTGTCC 004960
004961 AGATCACTGT TAAGTGGTTG AGCTGAGCTT TCATGTGTAC TCATTAGCCA AAGTGTCTTC CTTCTTCCCC TCTGCCCTCT 005040
005041 TCCCTCTTTC CTTTCATCGC CTATTTTCTT ATCCAAGGAT GCCCTGGATA TTAGTTTACC TTCATTTGAA TGGAGAAAAA 005120
005121 TGCCCATTGT TAACTGTTAA CTGTTGGGGT GAGGGGATGG GAAGGTGTTC AGTggaaggt ctctcaatct ccttgagagt 005200
005201 tagtttactt tttttgcaaa aatggagaaa atgaaacttg tctcatttgg tggttgcatg tattaTTAAA TCACATACAA 005280
005281 CCGATCACAA AATCAATGTG TAAGAAAGTG TCTGGGAAAA TCTTCCAAGG CATACAGCCC TGAGGGACTT TTGTAGAAAA 005360
005361 TCATTTAGAA AGTAAGGCAT CCATTACTCA CCTAGGGTAT TAATTAATTT GTATTCTTGA AAttcttttt tttttttttt 005440
005441 gagatggagt cttgctctgt tgcttaggct ggagtgcagt ggcgcgatct tggctcactg caacttccgt gccctgggct 005520
005521 caaccaattc tcctgcctca gcctcccaag taactgggac tacaggcaca tgccaccaca cctggctaat ttttgtattt 005600
005601 ttagtagaga cggtttcacc atgttgccta ggctggtctc gaactcctga cctcaactga tctggccttg gcttcccaac 005680
005681 gtgctgggat tataggcatg agccaccatg cccggccTGT ATTTTTGAAT TTCTACATTG TTGACATGCC TTGAAGTCTT 005760
005761 AGACGATGAG CAAGAAACAG AAATCATGTA GCACATATAT TCAACATTCC CACGTAATTT TAGGTTTCTA TTTGGTCTCT 005840
005841 TTCAAGCGGT AAGTAATTTA CTTTGATCTT CTCTGCTAGG TTATAACAAA AGTTGACATT GTAGCTCTGC CACTCACTAG 005920
005921 AAATATCATC TTGTTTATGT TATTTAACTT TATGACCTCT AATTGTGAAG GTTAAAGGAA AGAGCACATA TAAAAGCTCC 006000
006001 TGGTACATTA TGGTTAGTCA GGAAGTAAAA GTTTTTTTTT TAAATTGCat tgttattatt attactgtta ttattaatat 006080
006081 cattGGTATG CAAGACACTG AGTTATACAT ATTTGACTTG TGAACATATT TGTTATTTTA AAAAttgaaa taatttgtct 006160
006161 taaaaaagtt acaaaaatag tacagacaat tcccatatat ttcgtcaccc agcttcccct actgtttaac atcttacata 006240
006241 agcacagtat gatgatcaac actgggaaat taacattgct acaatactat taagtaaact atagatttga cttgaatttg 006320
006321 caggttttcc cattaacggt tttttctgat ccaggatcca aaccttgatc tccaattgaa cttagttatg agaaggagac 006400
006401 aaacttagtc ttttataact tagtttttcc ttgtctttca tgattttgac acttctgagg aaagctggtc agtaaccttg 006480
006481 tagaatgccc tccaatttgg ctttgtctgt attttctctg attaaattga gataatacaa ttttggcaag aatacctcag 006560
006561 aagtaatgtt gtgtcctttc tcatacacca tatccagaag tacacaatgc tagtatatat tattactggt gaaattaaca 006640
006641 ttgatctctg ggttaaagtg gtgtcttcca ggtttctcca ctaaattacc atttttccct cagtgactaa cagatatctt 006720
006721 ggggaaatac tttaaaacta cgcaaatatt gccaggcgtg gtggcgtatg cctgtaatcc tagcactgtg ggaggccaag 006800
006801 gtgggcggat cacttgaggt caggagttcg agaccagcct ggccaacatg gtgaaacctt gtctctacca aaaagtggtg 006880
006881 gtgtgcgcct ataatcccag ctacttggga ggctgaggca ggagaatagc ttgaacccag gaggaggagg ttgcagtgag 006960
006961 ccgagatcct gccattgcac tctagcctgg gggataagag caaaactctg tctcaaaaca aaaacaaaaa caaaactatg 007040
007041 caaatatcct gtttcttgta ccttcaccca ctagttttag catctatgga tgattcttgc ctgccacaat tattactatg 007120
007121 gcatttgcct attagtgatt ttctgtttcc ttcatttctt ctctattaat aggaattctt ctctaagaga gagttattct 007200
007201 cctccctcat ttattttttt atatcaatat gggctgatga atatttattt tattttatgg gttataatcg aacactgtca 007280
007281 ttatttattt tgttgctcca gtggttccag ctctgggcat taggagctta aacaggttgg ctcctgtatc ctttcaacat 007360
007361 gcctcattat ttttagtgct ttcttgcttt ttgatgctta ctttttaatc taggctcatc ttgtactttc tttgccccaa 007440
007441 ccatggaatt gatcttttct ccaaagaact ctgattcctt ttattggaaa atggacttag gaaccaagat cttggcattg 007520
007521 agtagtctca ttgctactgg ggtttcattg cttctgcgtc ctctcagtgg acagagtttg gaaatatatg caggtatgct 007600
007601 aacacacata catatgttta tatttgtaaa ttataaaatt gtataatttt aaatttctgt attataaaat tatacatatg 007680
007681 ttATAAATCT ATGTTTATTT CAACATATAT CTGTATAACT ATTAAGGACC ACAATGAATA CATTCAAAGG TAAATGTGTG 007760
007761 AATATCTCTA AGGCATACTT CTACTTATCT CCTAATAATA AAGAGAGTAG GTCCATTACA CTATTGCAGA GTCATTAGTA 007840
007841 Cttgtttact ttcaagtttt atgttgtaat tcagatagct gaggttgtca gagaagagac ctAGCCTTAT GTAATTCTGG 007920
007921 AACCAGAAAA AGAAATCATG GAACTATCCA ATTCATgttt cctaaactgg tgttccatgg aatactattt taggagttgt 008000
008001 taatagcatt atcctgatca aagggttttg cggttccata agtttgggaa acagcattgt agatcctccA CACTTGTGTG 008080
008081 ACACTGCCAA TGGATTATTT TATTTATATG tttatttatt tttagggatg gggtcttgcc aggttgccca ggctggcctc 008160
008161 aaactcctgg gcccaagcag tcctcccact tcagtctcct gagttgcgag attacaggtg tgagacacca tgcccagcAT 008240
008241 GCCTATGGAT TATTAAAGGA GTTTTTAAAA ATTTGTTTTC CAggctgggt gcagtggctc acag
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Predicted Small Protein

Name NONHSAT128554_smProtein_461:673
Length 71
Molecular weight 7925.1959
Aromaticity 0.128571428571
Instability index 51.7057142857
Isoelectric point 6.21148681641
Runs 9
Runs residual 0.0162659123055
Runs probability 0.0395591670102
Amino acid sequence METLYSSNNSPFSSLHIPPLTAILLSVSISLTTLDTSYTWNHKAFICIILLSLMSSSFIH
VIVYDRIFLF
Secondary structure LEEEEELLLLLLLLLLLLLLEEEEEEEEEEEEELLLLLLHHHHHHHHHHHHHHHLLLEEE
EEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLHHHHHHHHHHHHHHHHHH
HHHLLLLLLL
PiMo iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooTTTTTTTTTTTTTTTTTT
TTTiiiiiii