NONHSAT129000

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT129000

Source

NONCODE4.0

Same with

,

Classification

sense

Length

844 nt

Genomic location

chr8-:127565060..127568664

Exon number

2

Exons

127565060..127565748,127568510..127568664

Genome context

Sequence
000001 TTGCAGTAGC AGCCGCTGCT CCCTTTCTCC CTCTCTTCCT CCCTCTTTTG CCACTGTCTG GGCCCCATCT GGGATTCCTG 000080
000081 GGCCCTTTGG AAAAGAGTTG GTGAAATGCG CAGCCGGCTG TGGACGGGGG AGGAGGAAGG GGACAGAGGG AGCAGGAATA 000160
000161 AGACTGTAGA ACTGTTTTGT ACTGTGAATT ACGGATGCTC TTTGAAGGAA AGAAATATCG ATTCTAATGT TCTTCAGAAG 000240
000241 TTCTGGCAGG GATAAGCAGG ACATCGACTG GAACGTATGC TAAATGAAAG CAGACAAATT TCTATTTTCT TACCTGAGCA 000320
000321 AATATTTTAT TGAAACTGCT TATGTATGTC AAAGGAGCCC ACAACTTCAG CTACACAACT TTTTGTATTG AAAGAACTCA 000400
000401 TACTTTTTGT AGCTTTTATT TCACATTTAA TTTAAAGTGA CTTTTAGCAC TAAAATGCCT AGAAGATTTT ACTCCAGACC 000480
000481 TATAAGGAAA TGTTTAGTTT TTATGAAAAA TGACAAGTCG ATGGTTAAAC TTCTCATGTC TTTGGTGCTT TGGCCCTAAT 000560
000561 AGCACTGGAC AACACCACGA CCACATGGAA ACATATTTTT GGAAGCAAAA CTTTAATTTT ATATAACGTA TGCTATGGAG 000640
000641 AGCTAAGACA ATTTAAGGAC TACTTGTTTT CTATTTTTTT TCTTAATAAA ATGGAATCCA CTGTGTTGAA GACTCTTGAT 000720
000721 ATCATGTGCT TGTCTAACCA TTTTTTGTTT TATAAATTAG AATAAAATAT AGTTGTGATA ATGGTCATCG AATGGATTTG 000800
000801 TTTGGAAAGC TACATCTTAT TTGTGAAATG TTTTTTAAAT CAGA
[back to top]

Predicted Small Protein

Name NONHSAT129000_smProtein_509:625
Length 39
Molecular weight 4712.2453
Aromaticity 0.236842105263
Instability index 44.3684210526
Isoelectric point 6.80035400391
Runs 7
Runs residual 0.0115997229917
Runs probability 0.0232417291241
Amino acid sequence MTSRWLNFSCLWCFGPNSTGQHHDHMETYFWKQNFNFI
Secondary structure LLEEEELLEEEELLLLLLLLLLHHHHHHHHHHHHLLLL
PRMN -
PiMo -