NONHSAT129023
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129023 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
16542 nt |
Genomic location |
chr8+:128196162..128215640 |
Exon number |
3 |
Exons |
128196162..128204543,128206862..128211244,128211864..128215640 |
Genome context |
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Sequence |
000001 cacacgtatg cttattgcag cactaattac aatagaaaag acttggaacc aacccaaatg cccatcaatg ataaagcaaa 000080
000081 catggcacat ggcatatacc atggaatact atgcagccac aaaaaataat gggttcatgt cctttacagg gacatggatg 000160 000161 aagctgcaag ccataattct cagccaacta acacaggaac agaaaaccaa acactgtgtg ttctcactca taagtgggag 000240 000241 ctgaacagtg agaacacaag gacacacaga gaggaacatc acaccctggg gcctgttgag gggtggggcg cgttgagggg 000320 000321 tggggcccaa ggggagggag agcattacga caaataccta atgcatgtgg gacttaaaac ctagatgacg ggttgatagg 000400 000401 tgcagcaaac caccatggca catgtaacaa acccgcagtt ctgcacatgt atcccagaac ttaaagtaaa ataaTAATAA 000480 000481 TTTAAAAAAA CAGGGCAGAG GTAAAATGGt aaaaaaataa aataaaataa aaGACAGGAG CCTGAGGTCA GCCACCAACA 000560 000561 GTCTTTGTAA CCCTCAGGTG GCACATGTCT TTTTTTCTCA TAGATGGAGA AAATTTCCAG GGTTAATCTA CTATCTTGCC 000640 000641 AAAAATACCC ATGATTTGTC AGTTAATCCC CTGATATTCT TTGTGCTGGA AAATCTGTCA GAATGACCAA AAAGGCTTAC 000720 000721 ATTCTACAGT CTATGAGAAA CAAAACCACT GGGGTAGACT GAAATGAAAT ACAGTCATTA GTAGTAAGTT TGAGGTTGAC 000800 000801 TGCTCTTTAA AAAAAGAAAC AGTTTTTTTT TTCTTCTGTT TTTCCAGTAG TGTCACTCTT CAGGGGCCCC TCTTTACTTT 000880 000881 GTACTCTTTG ACAGTCAGAA ATATACCTAC CCATTTCCAA TTTCCTACTA TTGTACTTGA AATATGGATT TCACATATTT 000960 000961 GGGGTAATCA CTTCATCAGT AAAGTTGGCC TTCGTAAGTT AAAAACACTC AAATTTTAGA AACTCAATGT TCTGTGGGTT 001040 001041 ACAAATGACT GCCCACCATG CTGTGGGGCA TGACACCCTT TTGTAATTTC TGAAATACGA AGTACTATTT TTTCTTTAAT 001120 001121 GCATTCTCTC TTTTTAGTTT CTCCATCCTG TGATATGTCT GTCCAAAAGG ACTTCCCAAA AACCACTGTA TGGCAGAAAA 001200 001201 GGTTTTCAAA ATGCATGAGA GAATTATAGC AAAGAGAAAT AACTCACACT AAAGTTTTTA AAATATCTCC GGACTATGGC 001280 001281 TAGGAACTAT TACTAtggct aacaagtgta atttcagcat tttgggaggc caaggcaggc agatccctta agtctaggag 001360 001361 tttgagacca gcttgggcaa tgtggtgaaa cccccctctg caaaaaatac aaaataatta gcggggtgtg gtggtgcaca 001440 001441 cctgtggtcc cagctactca tggaggctaa ggagggagga tcacttgagc ccgggaggca gaggttgcag tgagctaaga 001520 001521 ttatgccact gcaccccagc ctgggagaca gattctgtct caaaaaaaaa aaaaaaaTCT CTGGACTATA AACTCTCATG 001600 001601 AATCTAGCAT TATTTGGATC AGAAATATAT TCAtaggata gactgtgatg acaaataaat caaatttggg atgcctcaac 001680 001681 acaagaaata tttttatgta tcattatgta acagtccagg gaggctgaaa atagagtgta tgttgcaggt aagaaatttt 001760 001761 gctctgcagt cattcaggaa ttgaagctga tagtgattct gccatcttga acatgtggca tcgctgtctg tctggagggt 001840 001841 gccatcacag tcagctagaa ggggaaagga cacagagaaa cacatatgga gtggccacat cacttccatt cacattccac 001920 001921 tgcccaaagc tcatggccac aattaattgc aagagaagct aggaaatgct atctctatat atacacgaag gaagaagtgg 002000 002001 aaggtggact ttggtaaacC GTATCTCATG TAAGAAAAAT TAggctgggc atggtggctc atgcctgtat tcccagcact 002080 002081 ttgggaggct gaagacggtg gatcaactga ggtcaggagt tcaagaccag cctgaccaac atggtgaaac cccgtctctc 002160 002161 ctaaaaatac aaaattagcc aggcatggtg gtgcatgcct gtagtcccag ctactgggga ggctgaggca gaagaattgc 002240 002241 ttgaacccga aagacggagg ttgcagtgag ccaagattgc gccattccac tccagcctgg gcaataagag tgaaactctg 002320 002321 tctcaaaaaa aagaaaagaa aaaagaaaga aaGAAAAATT AAAACTTTCA ATAAGAGAAT ATTATTCTTC AGTATTATTT 002400 002401 TCCATCACTT CCCAAAGTGA TGCTTAACTT CCTGCTAGAC CAGCTTTCAT GCTGATCTCA AAACACAGTG TTCTTCCAGT 002480 002481 CTGTCTCATG CTCTCCCATA TCTGCAATCT TTGCTCTGCA CAGTGGTAAG GACCATTTTT CTAATTCTAT ATTCTTGAAT 002560 002561 CACTCCCAGT TATTCCCTGG ATAGAGTAAT ATGAGGCATG GTGTctctct gaatttcttt ctttatctct aaaatgggaa 002640 002641 tactactaat atcaacctca ttgttgatac gtattaaatg tagttgactt catatatgta aagcacttag tatagtgAAC 002720 002721 GTGTCTGAAT TATTGTTCTA TAACCTTACC TTCCATGATT CTATCTAATA CACATCCCAA CTCAGTGATA CACAGTGTCA 002800 002801 ATGACAGAAA CATAATCAGC AAGAATAACA ATCACTTATG CAGTGCTTCC TATGTGCcag aaactgtgag ataataaatg 002880 002881 tttgtttttg ttgttttaag acactaaatt ttagggtgat ttgttacata gtagcagata aAGTGGTAAG AGGTTATGTC 002960 002961 TACTCTGTTT AACTGTTCTG GGCCTAGTTT CCTACAGTCT CTAATGTTTC ATCTGTAAAA TGACGACAAT TCCCCTTTTA 003040 003041 TCCATTTGTT ACAATTACAT TAAAGTATTA CCTTAGACTA AGACACATGT TACAAGGGAT ATGAAAGTGT TTCACTCAAT 003120 003121 GCCCAGCACA TGGAAGATAT TTAGTAAATA TTTCCATAAT ACTTCTGCTG CAACAAATCA CACAGCTCTC TCCTCACTAC 003200 003201 CAGCTTGGAT TTCTAGCAAT GGAGAGAGTT TCTTTAATGA ATTCCTACAC ATAATTATAA GATCCTACAT AGGTTGCTAT 003280 003281 CCAAGAAAAT TAAGGAAAAA ATCATTTCTA CACTAATTCT CAGCATGCCT GAGCAGCTTA CAAAGGAAGC TCTTTCCACG 003360 003361 TGTCAGTGTC ACACTCCAGG ATTTTAATGT CCCATTTCTG AGAAACCATT CCAAACTGCG GTAAATGCAG TCCAAATGTA 003440 003441 TAAGGACTTG GTACATTGGT AACAAAGCAC ATGCAAGAAA AATATGCAAA CTCAGGAAAA ATGCAAATTT GAAACAGTAA 003520 003521 GTGATTTCAC TTGGTCATGA AATACCCCAG GGAGTGCACC AGGGCAGTGA TTTATTAAGA GAACTTTTAG AAGTAAGTGT 003600 003601 ACAACCCCAA GCGCTCTGTG GGTTTCTATA AGACCCCACT TTTACAATTG GGAGAGACTA AATTCTCTTG GGCCTTTAAT 003680 003681 TATCTGTTCT TAAAAACCTA AATAATAAAC ATTGCAAGCA CTCAGCCAGT TCATAATTAT TTTCATGACA GTGACCCTCT 003760 003761 TGGGGTTTTG CTGATTGGTC CTTACTTAGA AGGTGTAAAT AGAGTAGGCA AGTAAGAAAA ACAAAGCATA AAAGAGGCAG 003840 003841 TGCATCTCTC TGCTTGAGGA AAACTCACTT TGGACAGCAC CTTGAATGCT ATCAGGGAAG CTAGAGTGTT CTCCTGTTCT 003920 003921 TTGCTGTCCT TGCCAGTGTC TTCTCCTGAA CTCACATCAG AAGCATGCCT TCAAGGGGAA AATGCAACAA TAGTAATATT 004000 004001 AATAATAATG AGTGAAGTGT ATTAAGCACT TTTGTGCCAG TACTGTTCTC agacaggcaa acagactatt tttcacaata 004080 004081 tttcacaaat gaggaacaga aaagttaata acttgaccaa agtcttacag taagcaggtg gtaccagcag ggttctaacc 004160 004161 caggcactcc aattctaagg tcaACTTTGT TAGTGTTATC TAAAAAAGAA AAGCAATAAT AAATTATCCA CAAGAAAATT 004240 004241 TTACAACTCA AGTTTTTCAT ACTCTTTAAA AAGGCATTTT TTCACATGTA CTCTCATGTT CTATGATTAG ACCTAATCAT 004320 004321 TGTCACTTCA CGGCTAGAGA AACTAAGACC AGAAGAGCTT CCAGATCTTG ACTAGCACCA CTCAATgagt gggatgacca 004400 004401 gaaccctgta ctgatcatgc aaacttcacc acataacagc ttgtgatatt gagtgagttg tttcacctat acgacccctc 004480 004481 taaaccaatt tattaatcta gaaaatggga ataatagcaa tttctatgta ataagttgtt ggagcacaag ataaagttat 004560 004561 atgtataaaa catttagcac agttcctggt gcataacagg tctgtagtaa atatttgttg taattAGCAG CAAAATCATC 004640 004641 TCCCTCATTA CTGCAGTTGA TTTTCCTTTA TTATTGGAAA GAAATTTCTC AACTGAGTTT CAGTTGAATA CAGTATTAGA 004720 004721 TTATTCCTTA ACTGAGTTTC AGCATTTTAA ATGTATACTC CCTACTCAAA ACTACCTACT AAAtcacgcc tgtaattcca 004800 004801 gcactctggc aggccaaggc gggtggatca tgaggtcagg agatcaagac catcctggct aacacgatga aaccccatct 004880 004881 ctactaaaaa atgcaaaaaa attagccagg cgtggtggct ggcacctgta gtcccagcta cttgggaggc tgaggcagga 004960 004961 gaatggtgtg aacccgggag gcagagcttg cagtgggccg agatcgtgcc actgcaccac agcctgggcg acagagtgag 005040 005041 actccgtctc aaaaacaaac aaaaaaacac aaaaaTCTAC CTACTAAAAA GAAGTTCTTC AATGCTTAGA CTTTGAGCAA 005120 005121 AGAAAAAGTC TGCTCTAACA GGAAGCTGGT GATATAGAAA GGTAAAGTTT CACTTCACAG GCACTTTGAT TTCCCTTCGA 005200 005201 GGTGGATACT GAATGATTTG TGTGTGCGCA CATTTTTCTA TGCATTATTC AAAATTAAAA TTCCTTAGAG GAAACCACTG 005280 005281 AAAGCCAATC ATTTACAAAA CTTTAAAAAT GACATCTTGA AGAGTTCTTT GGTGCTCATT CATCAAACTT AGCAATGATT 005360 005361 TAACTGTAAT TCTTTATTCA GATTCATCTC CCACAAAATA AAAATGCCAT AAAGCTTTAC AGTACTGTAT CCTAATGAAT 005440 005441 AGAGAAACTA AAGAAAAAGT AAGATGAGCA AGTGAGAGGA AAACCCGAAA ATGAGCCTGT CCTGGCATGT TTCTAAAAAG 005520 005521 AAAGAAACAA ACAAACAAGC AGCCCCTCCT CTCAGCTCTT GGGAAAGAAA TATTGAATCT TGACAATATC TGCACTTCAT 005600 005601 AGTTGATTCA TAGCATGACC TATCTCAAAC AATTTAAGAT TCAAATGAAG TTTGCAATTA ATCTTTCGAT ATcactttgc 005680 005681 aaaacattct cataacctta tccagccctt ttacaaatca atcctgtgag gtgaacatca ctgtgttccc attttacaga 005760 005761 gaaaggcact gagccacaga gaggttatat actcatgatc aataagctgg taagactaag aaccaggaat gatactgtct 005840 005841 tccttctcca aatatcctgt tctttATTAT GAGTACCTAA ACAGTATTAA AAATTAATTA CAGCTCAACA ATAGTAAGTA 005920 005921 AATGTCCTCA TGTGAAATCC ACCGTTTAAA ACTTAAGGTT ATCTATTTAT CAAATAAATT AAATCCTACT CACTTAACAA 006000 006001 TATTCATTGA GCTCATTCTG TAAACAACCA TTAGGCCAGG GGCAGATATG AAATATGAGG CTCAATCTGT GATCACAGAG 006080 006081 ATGAAATATA CAATTTAGAG AGAGAAAGAT AAGCATGATG ACAAATAAAT AATGTATGAA AATTAGCCAT TATCTTAGGC 006160 006161 CAACTTTTTC TAAGCTGTAA GCTGTCTGCC TACTTCTGCC AGGTGTTAGT AATTGTTTTA AAAAGTGGGG GAAGAAGAGT 006240 006241 ACTTCATGGT GGGAAGATAT TCATTGAGGA CATAAGCatc ttcctcttag aaattaacaa tgcacagtgg cctattgcaa 006320 006321 gttttgaaag ccctgcaaac aataaaagcc tgattagttt ttattgaatc agtatctcct aaacACTTTT TCATGAAACA 006400 006401 AGGTTACTCA CAAATCTTGT CGAGGAACTA ATGTCCTAGG AAagtggttt tcaagcttga gcatgtacat aagtatcatt 006480 006481 ggaaaggttg caaaaataca aatgtgtggg ctccactcca gaaattctga ttgaagtggt ctcatctgtc atctgagaac 006560 006561 ttgcattttt gtcagattcc tagctgatct gatgtttcag gactgagaac ttaatttgag TAGTATCTCT ACAGAACAGT 006640 006641 TTTTAAAATG TTCTCCTGGA GTAGGATGAT TATACTTAAC aaaaatgtaa tacactcagg tgatggacac ccttagtatc 006720 006721 ctgattggat cactacacat tatatacatg taacacattt tctcaagtac cccataaatt tgcacaaata aataaataaa 006800 006801 taaaaTTATA CTTTTCTCaa ataaaaaaat aaaataaatG TTCCTCTTGA ATGGTAGAAT CTTTGTTTTT TTGTGATAAT 006880 006881 CATAAATACA TATAAATATT CTCATCATTA CATGCATGTA GTTACCTTCC TTTACATGAT GCACCAGAAA GAATACCCAC 006960 006961 TCTAAGAAGG AAAGAATGAA GAGAAGAAGG CATTGTTTAA AAGACCTATT ATTAGAATAA Gtcaaattct atgtctacca 007040 007041 ttattaagct gtttgacttt gagcaggGAT TGGAAGGCAT TTTAAATTGA GGTGGAGATA TGCACAAAGC CACGTGGGAA 007120 007121 ATGTCATGTG TCCCTGCATA AAGAGAACAA GCTATTTTGC TTGGTTGGAG ATGAGGAGAC AGAGGCTGTA CATAAGAATG 007200 007201 TGTTCAATTT AAAGCAACAA AATATATCGA CCAAACTACT TTGAGCAATC AAGGGGATAT ATTGGCTCAC ATCACTGAAA 007280 007281 TATATACTGG CACAGCAGAT TTCCAGTTAG GTCTGATCTG CTAGCtctgt cccctccaga atacaggctc caggcaggca 007360 007361 ggaaggaaga ggacatcagt tctcttggtg tctagcacgc tgcctgtatt aaggtaggtc ctcaataaat tcatgttgta 007440 007441 ggaaatgaat GCATGTTCTC AAAGATGCGG TTACTTTCAG TATCACTGCT TTCCTCATGG TTTCCACTTC AATATTAGTC 007520 007521 TAACTTGCCT TAGGGACCCA AGATGGCTGC TATTCACTTC AATTAGCTAA ACACTTCTCT TTTCATGGCt gtgagagact 007600 007601 agctacctct tccataaatg aattttctct tctttctggg cacaatagtc tctatttccc agcctctttt acaattaggt 007680 007681 gtatccatgc aactcagttc tagccaatgg cgtgtgagta gtagtgatat ccaccacttg cagacctaca cataaaggct 007760 007761 cccagacaca tcttctgtgc tctttactgg aacacttgct tgattccaat aaatacagca accttagcag ctacatattg 007840 007841 cagttggcag agctttcatG TTTCAGCTTC TTCATATTTT TTAGTTTTGT TGTCACTGTT GGTTTTTTTT TTAATTGATT 007920 007921 CAGGAGATGA CCTAATAAAA AATTGAAGAA AAATAAAGCA TTTTGTTCTG GATTTCTCAT TAGGAACATG AGGTTTACTC 008000 008001 TATTGCAACT GGCTTAGTTC ATATGATCAT CCCCTGAGGT GAGGGAAAAA GATGCGTGAA TTGATTAAGC CAAGGTCACA 008080 008081 TGGTCGAAAT GTAGAATTGG GTTTTGAGGT CAGTTTCCCT AAATCACCCA GATATCCAAG TGGAAATCAG GCTCCATTGA 008160 008161 CAAAAGGGAA CAGTTCTTAG AAATGCAACT ACAAATGTCC AATCCCAGTT GGCAAGTTCG AAGCAAGGAA GGGCTTTCCA 008240 008241 TTAAAGAATG TGGATGCTAC CTGGTGGGCA ACTGGAGGCC ACTGGCATAT ATTTTTTTTG GGGGGGGTTT CATAAACTAT 008320 008321 TGGTtttttt aattattatt atactttaag ttttagggta catgtgcaca atgtgcaggt tatgatgtgc tgctggattt 008400 008401 ggtttgACCA CTGGCATATT TTAAGCATGG GAGTAACACT GTCAGGTTTT TTAAATTACA AAATGCTTTA GCATAGAGAA 008480 008481 AATTATAAAG AACAATATAA GTAACAGATA TGCACTCACT ATCCTGCTTA ATCAAATGTC ACACTTTGCC AAGCTTGATT 008560 008561 CAAATTtttt aaagcaaaga aacattacag atatggctgc aacatcctat gtgccccacc gctgatacat acctctcttc 008640 008641 ccaagggtaa ccactttctg actttgatac ttatcattcc caggcatgat taaatgctat tgctgaattt gcatatatac 008720 008721 ataaataata tatacagttg tttgcatgtt ctaaaacttt gcattaaata atatcaaata attaaaaatt ttcacaaatt 008800 008801 gcatttttaa ctcagtcttt tataagattg ccaataatga tatctcttca gatcattcat tttgactatt atattatttt 008880 008881 tcattgtatg actatgccat ggctcactta tccattctgt tattgataaa catttgtgtt gtttccacaa ttttgctatt 008960 008961 aaaataatgg cattgtgaac attcttgtgt gtatatcact gtgtacacat gctagagttt ctctaatgta ttatggtgta 009040 009041 tattgctggg ccaaaggcta tgtaagtctt caacttccct agatgtcata ccaaCTCATA CATATATGAC CAGTGTGAGC 009120 009121 ATTCTCAGTG CTCTACATTG TCCAGATTCT ACATGAAGCA CTGGTGGCCT ATTGGTCAGG TTGACTGATA ttagaaggtt 009200 009201 attgccaaag tctatgtgag agagactgag ggtctgaaat acctagatgt aagggatata aagtgagaga ggaaagaagt 009280 009281 taacatattt aggagcaaaa tccacatgac tttgtgattg attatggaga aaataaggag aagaagggaa caggaagact 009360 009361 ctcaagtctc cagattgaac acaagaggaa gcttatgtgc cgtgagactg atgacaaatt ccttttgaac atagtgcctt 009440 009441 tgagggcttg gtagtaaaaa agaaagcact atccatcagg catttggata tttaggtctg gaagactgaa aagagatcaa 009520 009521 aacagaaaat acaaattata gaatcatcga gatgggtaaa atcagaagag ttggatcaag aaaagtacct agaatcagta 009600 009601 gagaagtgag ttaagaaaat atctctggga aacattaata tttaaaggta tataaaagga agagaagact gtggagaaga 009680 009681 cagagactga agaaggagac aaaatgtgtc atactgtagt agccagagga atagagcttc aaagaatgag tggtcaacca 009760 009761 cattaaacac agctagaaaa ccaagaaggt aaagaaatga aaattaaaca ttaacataca atgaagttat tgagtccatg 009840 009841 ttaaaatggt ttcaatggaa tagcatcaat ggaaataatt gcaattagta aaagaatttt agaaaaagaa aaaattaata 009920 009921 cagctaactt tctcaaatta aattttttga aaataaaaca gtgagatggA ATTCGAGTGC AAGATGTTTG TTGAAAATCA 010000 010001 ACACACATGA AAGGAAAGAG AGTgaaccta aaaaaattgg ctccagagtc tattaatgta aagactatgt tatattgtCT 010080 010081 CTCTATCTTT AGGGAAACAT ATACCCAATT CATCTTGTGT CACCAGAATC AGATTCATCA AACCCATTCT GGACCACTCT 010160 010161 GATCACTAGT TTCACCCTCA CAGTCATAGT AAAGAAACTA AAGCAAAAGA CTACAAGAGC AAAGGACAGA AAGGGAAATG 010240 010241 TTATTTTCTC CCCTCACCTT TGCCCTCTTT GATTTTCTCC ATTGTTGCTA AAAGGAACAC TTAGAAAACT ATGAAAGAAA 010320 010321 CTTCTGCCTG TAAATGCAGC TCCATGATTA TGAATTCTGA ATCCTTGTAA CAGAAGAACC AATAGGACTG ATCCATGACT 010400 010401 TCTATTAGTA GAGACTGGGA AGGTAGGTGA CTTTAGCTCA CCAAGCCTGA TCACAGCAAA ATAGAAAATG ATCACAGTGT 010480 010481 CCCCTTTTTA TCCTGGGGTA ACAATGAACA TTCAGTGGGA GCCAACTACT GTATTAAAGT CCTGGGTGCA GCTCCTGGCA 010560 010561 CATGACATGG CCCACAAGGT AGTAGTTCTG AGTACCCTTG CCTATCAGTG GTGCTGGGGC GAGAAGGGAG GGCAGCCTGC 010640 010641 TCACTAGGGA GAGCAGGAAT GAGGCTAGGA AGTACAGGGA CCTGGCAAAG ATGTCTCCTG TTTGAGAGAG ACTTCAGTTA 010720 010721 ATGTTCAGTC AACTTCCTGT GGTGCTAAGA AGTGAAAGTT GAACTTGACT ATCAAGGAAC AGAGGCAGGT TGTTAGCTGG 010800 010801 GCCCCTGGGA GGAAGTCAAC AAGCTCCACC ACATCTGACA ACACCTACTG CTTGCAGCCC TTCCCCCAGG TCAGGCAGCT 010880 010881 GCACACCTCA TGCTTCCAAC TGAGGGGGAA TGAATGGGTA CCAAGAGTAG GTGAGTCTAC TTCTTTCCCA GGGGTGAGTA 010960 010961 GCGGGTGAAG AAATCAGCAT GTAGTGGACA TTTACATGTG CCGGATACCT CATAtatgca gtgtggtatc attatcctca 011040 011041 ctgtgcagat gaagacactg aggctcaggg acttgttcaa gacacacatc tggtcaatag ggagccagga ttcaaaatca 011120 011121 cgtcagtcta gtactcaagt cctctgttct ttccacgact acattAGATG TATCCCTAGA TAGTCTAGGT GTAACAGCAT 011200 011201 GAGTCTCCCA TGAAAGGAAG TGGGGGCTCT TGGAACATAC CTCTTTAGGA AGCCTTCCAT CATTGTGCTG CCTTCCTCCT 011280 011281 CTGTGCAGCC TCAGCACTCA CTGTTGAGcc cttctctagg agtttgcaat ctacggggag tgatgggcac ataaggaaat 011360 011361 aatttcaatg tagtatggca aatgctgagc tagataaatg cgcgaatgac tatgaagaac agaggattgg ggtcacctaa 011440 011441 ctcaacatga gactcatgga agtctcctga ggagaaacct ctgagtccta gagagtgaga attggccaga aaaattaaga 011520 011521 aggggcaggg aattccagag agaagtaaca ggtaaacaaa agcaaagagg cataagatag tctggagtct ggtcaaatta 011600 011601 caatcagttg gaagtagtag agaataaaat acaaagtgga gagaggggag aagtaaagct gaatagataa acagggTCAG 011680 011681 CTTACAGAGG GTCCTATGCA GGCTAAATTC CAGATGCTGC TATAAAAATA CAGGAAAGAA AACTCATGAA ATATTTTAAG 011760 011761 ATTTTTGTGG AATATTTTAA GAGCTTTTGT GAACATCTCA TGAAGCACTC CTGTGTTTGG AGGCAGCACT GGCAGCAAAT 011840 011841 CAAACATAAT AAAAGGTCTG TACATCAAAC ATTGACAcat ttattcaaca agcacatatt gagcacctac tatgtggcag 011920 011921 gaactctctt catcagcaag tattttggca ctaaataaaa cacagaacac accgccctct ttgaaatgac aataaagaaa 012000 012001 ataagtgaat tatatattat ctcagcagat attgcatggt atatggaaag catatcaggg aagggggtgt aaagtgtcat 012080 012081 gagaggaatt acaatattaa taggatgtta agacagctcc tactgaagcc atgtttaaac agacacttgg aggagaggag 012160 012161 ggagttggct aagttgatat ttggggtaag gcattccagg aagggggatc agccagttca aagccctggg gggtgggggc 012240 012241 tgtgcttggc atatttgagg agtggtaagg aggccagtgt ggctggaaca gaatgatcaa agaaaaaggt ggtagtaaat 012320 012321 gaggtcagat aaacagtaag agacaaggga tttttaggtc atctagaatt tagatttttt cctgagaggg cagaggagcc 012400 012401 acgagaaagc tctgagatga ggatgagatg atctaattca ggttttaact ggatagttca gagcaagagt gggggcaggg 012480 012481 aaccagtgag gagactgtgg caataatcac gaaaagtggt gcagcggctt ggaccaggga gttagcagtg gaagcagaga 012560 012561 gaagtgacaa cactctgcat atGGGAAAGG GTGGGCAGGA GAGAACAGTG CCCAAGATGA TCCAGTATTT TGGCCTGAGA 012640 012641 AGCTGGGGAA AAAGAAACAA CAACAACAAC ATCAGTGGAA GGGGTTTCAG GGAGTCCAGG TGTTCTGGTT GCAGCTTTGT 012720 012721 TTTGCCTTAA AAATAtttga gtacgtaact agtaatggga ttgctgtccG GCCTTTCCTC TTAGAGTTTG CAGTCTAAGG 012800 012801 TAGAGAAATA TAATAAAAGA AAATGCATGA ATTTTTAACT AATATGGTGT GGgttctaaa gctcagataa attatttcgt 012880 012881 ttagttctca caacaaccct ctgatgcagg cactattatt tcccccattt taataatgag gaaactgaag cacagagagc 012960 012961 ttggttgact tgcccaatat taccacactc tgtgtggcta agctgggatt tgaaccaaga aaactctctt cccataggtc 013040 013041 gtTGAAAAAT TATGAAAGGT TAAGCCACCT CTCTGCTTGT GTTGCCTATT TCCACCATGT GAGTCCAATG TGTGGTGACA 013120 013121 GAGAAGGGTA GATGTTTGGC ATCTGTGAAT TCTGTGGATT GTGTGTCATG ATTCTTTATT TCTGTCCTCT GTATCCTGAA 013200 013201 TTGCCACTAC CCTGAGCAGG TGATAAGAGT AAAATTCCAT TACATTGGTC TTGAGGGGAT GGGCAAACAC TTTGGACTCT 013280 013281 CTTGATATTC TAGTTATTAA ATATTGCTCA GCGTAAGTTA GACAATGAAT GAGACTTGTT GATGTTTTCA TTTCAATTTG 013360 013361 TCTTATAATG ATCTGTGCTC AACATGTAAA ACCAATAGAT GTAACACCTT TGGAATATTT CTGAGTAAAC ATGGGGCACC 013440 013441 AACTCAAAGA GCAAGAGGTA AAAATGCCTA GTGTGGATCA AAATCTACTC TATGACAGGG AATCTCATGG GCTCTGAAGG 013520 013521 ATTCTGGTCA CATAGGGAGT AAATAGCAGA CTCTCAATTC AGAGTCAGAT GTGAGTTCAC ACGCAATGTT TTGGGACTTC 013600 013601 ATCCTGTCTT TTCCCTGCTc tgggagtcat aagaattaag ttctaatcct aattctgttg ttatctacct gagtgacact 013680 013681 aattagatat ataacttctc tgaggctcga catttacatc tacaaataaa gaaggctaga atactaaagc ctcttctatt 013760 013761 tcttccaatt attgattgta tCGGCTCTTA CTCTATAAAT GGTTTCTTCT ATTTTAGGGA AATTAATTAT TTTGTTCTTA 013840 013841 TGGTGTTGCT GGACCTGTTG CTTTTCATTG CTGTAATTAC TTCTCTTTGT TGAAGACCTT TGCCAGACGA AATGTGATGG 013920 013921 GTGTATAAGG CTCTGGCATT TTGCCCAGGT CTGTAGCACA TAGAATTCCA CTAATGGGTC TGCTGGGCAT CTGAGACCAC 014000 014001 AGAGCCATTT GTCATAACAT GACAATTCCA GTTGGGCAGG GATAAATGTT AGCTTTAACG ATTTTGGACC AGAGTTTGTC 014080 014081 Tagagagaga gcagagtaca aagccaaaag catcatcttt agagctaagc aggcatgagt tcaaatccca acccagccac 014160 014161 ttactagata tgtagccACA GCCAccgcca agtctcaatt taaatgtcac tttctcaaac aggcctccta gggtctccca 014240 014241 cgttggctta gTCCAGAATA CTGGTTTATC CTTACGGTAT AAAATTTATT CCATCATTAT GCACCAGTAT TTAATAAATG 014320 014321 CTGAGGAATG TGGAACAAAT ATTTGTTAAA TAAAaagtga cttaatcctt ctctgtctca gtcctcactt cagtgaagtg 014400 014401 ggcaaaaggg tagaacAAGT TTCCTGTGCA AAAAGAATCA GGTCAAAGTG CCCTAGAAAT AGCAAACACT GTCACAACCC 014480 014481 TAGATAGCAT GATTACAATC TGAAATAAAC TAGTTCAAAA AGCAAATCTC AGACTCAAGT GGGGCTTTTT CTAGTTTAGA 014560 014561 ACTTGGAGTT AGAAGAAGAA AGAAGGGGGC TAAAGTGTGC TGCGTGTCTA GATGTGCCAG GCACTGTACG TAATAGAATG 014640 014641 TCACACATTT AATATTTGTC TAAAAGTGTG AAAGTGTGAA TTTCCATAAG AGGGACACAG GTTCTTGGTA AAACCAAGGT 014720 014721 TTGCTCTAAC TTTTCACACA CTTTGGCAGA CGGTTTTGCC TTTTTCTCCT AAGTTGGAAC TTTTGAGGCC ATTACTGCCA 014800 014801 GGAGGGAAAA GTTAGTGATG CTTATCTATG TTCAGAACTA GAAAATGGCC CCTTCTGGTC CCCAGTTTGG CCCCATTGTT 014880 014881 ATTCACATGC TGCCTATAAA AAGACAAAAC CTCCAGAAGG TGGAAAAGAT GAATATGCAG AATGCTACAC ATAGATACTC 014960 014961 ATGTAGGTGA GATGGCGAAC ACAGCAGATT TAGGTCTACC AATAAGATAC TACCCCATTT GGGATGACAC ACCTTCCTTA 015040 015041 GAAGTGACAG TGGCAGAACA TAGACAAAGG GACTAATTAA AAGTATGTGG GTTCTGCAGA TTGCATCTGG AGTAAGAGTC 015120 015121 CAGTGATCTA AATTGTAGGC CAAGGCCTCT TGCTTGCTAA CATcctctgt ctgcctcagt tttcttacct gcaaaatggA 015200 015201 TCACTGAACA TCACATTTCT CTTTATTAAT TTATTCATTC ACTGAAGAAG CAAGCTGTCA AAAAGCAACT GCTACATATG 015280 015281 TCAAGAAAGA tgccagatgc taaaataaaa tacaaaaatt tgattactac aaattgctac catcgaggag tcatagtcta 015360 015361 atgaaagaga aaaacatgag agtgaataat GAAGTCAGCA AAAAGTTCAA aagaaaaata aataaaaggc atagatatta 015440 015441 aaaatgaaga agtaaaacta tcttattcag aaaggatatg attatgtacg gagaaaatcc caaagaatct acaacatcag 015520 015521 actcatcagt gaatctagca agatcactgg atacagttta tatataaatg ttatcaataa ttgtatttct gtgcctgaca 015600 015601 acaaaaaatt gaagacaact tttaaaacaa caatgtttat aatgacaccg aaaaatatca aattagaagt tcatgtaaat 015680 015681 tgtagtttcc aagagctccc gctggaaatt ggaagccatt gttgaaataa attaaagaag atttaagcaa atggagagac 015760 015761 ttaccatggt tatggttcga aagactctac attgctaaga tgcaatttac tccaaaattg tctacagatt caatacaatt 015840 015841 tcagttaaag tttctgaaac tttcatttgt tgttgttgtt tttggaatag acaagctgat tctgaagttt atatacaaat 015920 015921 gcaaaggacg taaaacagct aaagaaaatt tgcagaagaa agaaactaaa agaattacac tgtcagattt cgagacctac 016000 016001 tacaaagcta cgattattaa cacagtgcat attggtacaa gaataggcaa atagactaaa gaaacagaag acagagtcca 016080 016081 gaaactgaac tacacataca cgatcatctg atttattaca aaggtgccaa ggcaattgag taggaagaga acgatgttct 016160 016161 acgtaaatgg caatattgag tatctgtatg gtaaaaaata aatcttggct atatgtcata taatatggac aaattaatta 016240 016241 caaatgtagt atacaccaaa tgtgaaaggt aaaacaaaat aacatgttaa aaaaagtata gtatcttacc ttgggatagc 016320 016321 agatatttct taaacaggac acaagaagtg aaaaggcaag ccacagcctg gaataataat tttatcataa tatatgtata 016400 016401 tgtttctatc tgagaaagta ctcataccca gaatacatta agaactctta ccaattaata acaaaaaTGT GTTATTAATA 016480 016481 TATACATATt atgtatacat tatatgtatc atatgtatat ggaccatgca catgatatgt at |
Predicted Small Protein
Name | NONHSAT129023_smProtein_12035:12295 |
Length | 87 |
Molecular weight | 9827.3154 |
Aromaticity | 0.0581395348837 |
Instability index | 68.9651162791 |
Isoelectric point | 9.94573974609 |
Runs | 13 |
Runs residual | 0.0115411315515 |
Runs probability | 0.0372725666843 |
Amino acid sequence | MVYGKHIREGGVKCHERNYNINRMLRQLLLKPCLNRHLEERRELAKLIFGVRHSRKGDQP VQSPGGWGLCLAYLRSGKEASVAGTE |
Secondary structure | LLLLEELLLLLLLLLLLLLHHHHHHHHHHLLLLLLLLHHHHHHHHHHHLLLEELLLLLLL LLLLLHHHHHHHHHHLLLEEEELLLL |
PRMN | - |
PiMo | - |