NONHSAT129178
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT129178 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
831 nt |
Genomic location |
chr8+:133008637..133023326 |
Exon number |
6 |
Exons |
133008637..133008744,133013016..133013245,133014006..133014054,133014850..133014953,133015483..133015532,133023037..133023326 |
Genome context |
|
Sequence |
000001 AACAATTTTA TTTTAGATGA AGATCGACTT TCTAGAAGAA AAAGCATTGT GGACACCGTA TCCATTCAGG TGGATATTTT 000080
000081 ATCCAACAAT GTTCCTTCTG ATGATGTGAA CAAAACAACA GAAGATTCCC AAGTTTAATC TGACTTCAAC TAGAACTATG 000160 000161 AAGCTCAGTA GCAAAACTGA GGGAGTGGAA CTCTTGCTGC TTGATTTCCA GCTAAAGCCT TTGTATTGCA GAGAAGCTAA 000240 000241 GGTGCAGAGA ATGACGTCTT TTGCTTTCAT TAGTCTTGCT GCCTTAGACT TAGCAAAAGA AGCTCATGAG CTAAAATTAG 000320 000321 GGATGACCAG ATTCCCAGGT TAGTAACACT GAAGAAATCA CTTTTGAAGC ATTGAAGAAA GCAATTGATA CCAGTGGAAT 000400 000401 GGAAGAACAG GAAAAGGAAA AGAGGCGTCT TGTGATAGAG AAATTTCAGA AAGCACCTTT TGAAGAAATA GCAGCACAGT 000480 000481 GTGAATCCAA AGCAAATTTG CTTCATGATA GACTTGCCCA AATATTGGAA CTCACCATAC GTCCTCCTCC CAGTCCATCA 000560 000561 GGAACACTGA CCATTACTTC TGGGCATGCC CAATACCAAT CTGTCCCAGT CTATGAGATG AAGTTTCCAG ATCTGTGTGT 000640 000641 GTACTGATCG GCGCATGAAG ACCTCAGGAT ATGATTTGTA AAGCCTAAAA ATTAAGGCCA AGCTGAGCTT TCAGGGTTTA 000720 000721 CTTAATGTGT ATTAACATAC TTCTTGAAAA TAATGATGGA ACATATCTTT AACCAAATGT TTGGCATACC ATATTAGAAG 000800 000801 TTTTGGAGCT ATATATAATT TCGAGTACTT T |
Predicted Small Protein
Name | NONHSAT129178_smProtein_398:646 |
Length | 83 |
Molecular weight | 9417.7332 |
Aromaticity | 0.0731707317073 |
Instability index | 71.706097561 |
Isoelectric point | 5.63775634766 |
Runs | 15 |
Runs residual | 0.0470251293422 |
Runs probability | 0.0265677442148 |
Amino acid sequence | MEEQEKEKRRLVIEKFQKAPFEEIAAQCESKANLLHDRLAQILELTIRPPPSPSGTLTIT SGHAQYQSVPVYEMKFPDLCVY |
Secondary structure | LLHHHHHHHHHHHHHHHLLLHHHHHHHHHHHHLHHHHHHHHHHHHHHLLLLLLLLEEEEE LLLLEEEELEEEEEELLLLEEL |
PRMN | - |
PiMo | - |