NONHSAT129209
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129209 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
895 nt |
Genomic location |
chr8-:134062455..134072533 |
Exon number |
2 |
Exons |
134062455..134063160,134072345..134072533 |
Genome context |
|
Sequence |
000001 GATGCACGAT GCTCTCTAAA CTGGGTCATT CTCCACTTGG AGGGCTCAGG GCACGGTTGA CTTTCCCCGT CTGTCTCCTA 000080
000081 TACCACAGGC TCTGGGCATC ACCAGCGGCC CCAGGGAAAA AGAAAGAAAT GGGAAACAGC ATGAAATCCA CCCCTGCGCC 000160 000161 TGCCGAGAGG CCCCTGCCCA ACCCGGAGGG ACTGGATAGC GACTTCCTTG CCGTGCTAAG TGACTACCCG TCTCCTGACA 000240 000241 TCAGCCCCCC GATATTCCGC CGAGGGGAGA AACTGCGTGT GATTTCTGAG TGAGTCAGCT CTCCAAAACT TGTGCAATCT 000320 000321 TCAAAGCAGG ATAAACTTGG TTTGGGAGAA AAGTATTTGA TTGTTAGCTA GAGTGGTCTA GTTCCACATG AGTCCTGGTC 000400 000401 CTATTATGAG GTGAGAAATT TGACCCATAC TGCAACCTTC CTCTTTAATG TGGCCAGtgc tctagaacct tccatagctc 000480 000481 cccactgcct ggtagatcaa atttaaattc cttaacttgg cttttgagat cctttatgat ccagcctctt ctcatattct 000560 000561 tcttatctcc caccacATGT GCAGTGTTGA TGTTATGTAG GAATGAAGAC CGGGAAGGCA GCCCCCAGGG TCTGGAAATC 000640 000641 CTTCGGATGA GAAAAAACAA AAATTTGCCT TCTCTCCTCT TACCTCTGCA GTCTGATTCA ATATGGGCTA TAGAACATGA 000720 000721 CAGAAGTTCT AAGCCCCTTT TATTTAGATC TTCACTGATT CAGATATATG AAACTATCTT TGGCTATACT GCAGAGCATA 000800 000801 AATCAACATA GTAAACATTT ATTTTTAAAA AGCCTCCAAC AGTTGGGAAC ATTAGCTGCT AATCCCTGAA AAGCAGCTAT 000880 000881 TTCTAGCACA TGGGA |
Predicted Small Protein
Name | NONHSAT129209_smProtein_8:292 |
Length | 95 |
Molecular weight | 10279.8584 |
Aromaticity | 0.063829787234 |
Instability index | 68.2595744681 |
Isoelectric point | 9.57550048828 |
Runs | 10 |
Runs residual | 0.0224329324699 |
Runs probability | 0.0243949832185 |
Amino acid sequence | MLSKLGHSPLGGLRARLTFPVCLLYHRLWASPAAPGKKKEMGNSMKSTPAPAERPLPNPE GLDSDFLAVLSDYPSPDISPPIFRRGEKLRVISE |
Secondary structure | LLLLLLLLLLLLLLEEEELLLEEEHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLHHHHHHLLLLLLLLLLLLLLLLLEEEEELL |
PRMN | - |
PiMo | - |