NONHSAT129288
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129288 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
712 nt |
Genomic location |
chr8+:136569699..136668710 |
Exon number |
5 |
Exons |
136569699..136569830,136594121..136594316,136619198..136619280,136660783..136660841,136668469..136668710 |
Genome context |
|
Sequence |
000001 TGATGAGATC AGGCAAGCAC AGCTCCAGGA GTTAACATAT TTGAATGGTG GTTCAGAAAA TGCAGATGTT CCAGTGGTTC 000080
000081 GAGGGAAACC CACCTTGCGT ACAAGAGGTG TACCAGCCCC AGCAATAACC AGGGGAAGGG GAGGAGTTAC AGCCCGGCCA 000160 000161 GTTGGAGTTG TAGTACCACG AGGGACGCCA ACTCCCAGAG GAGTCCTGTC CACCCGAGGG CCAGTGAGTC GGGGAAGAGG 000240 000241 ACTTCTCACT CCCAGAGCAA GAGGAGTCCC CCCAACTGGG TACAGACCTC CACCGCCACC CCCGACACAA GAGACTTATG 000320 000321 GAGAATATGA CTATGATGAT GGATATGGCA CTGCTTATGA TGAACAGAGT TATGATTCCT ATGATAACAG CTATAGCACC 000400 000401 CCAGCCCAAA GGAAATGTCA GCCATCTTGG AATGTCACAG GAACTGGTTG AACACCTGAA GCAAACAAAG GAACTTTCCT 000480 000481 TCTATTTATG CACTGCTTAA GAACCGTCAA CTCACCAACG TGCCTAGTCA GCAAATGAAT CCACTTGGGA ACTTGAAAAA 000560 000561 CATCTTAATT AATTTTTGTT TGCATAATTT TGTGTTCTGT GACATGTTTT TATTATATGG TATGCTTTTA ATTTGGAGAA 000640 000641 CCTACTTTTT TAAAAAACGG AAAGAAAATC TATCTTATTT TGTTGACTCC CAATAACAAA AAGAGAATGA TT |
Predicted Small Protein
Name | NONHSAT129288_smProtein_317:499 |
Length | 61 |
Molecular weight | 6832.2575 |
Aromaticity | 0.0333333333333 |
Instability index | 40.9118333333 |
Isoelectric point | 6.00555419922 |
Runs | 10 |
Runs residual | 0.0169326241135 |
Runs probability | 0.0384737678856 |
Amino acid sequence | MENMTMMMDMALLMMNRVMIPMITAIAPQPKGNVSHLGMSQELVEHLKQTKELSFYLCTA |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLEELLLLHHHHHHHHHHLHHHHEEEEEL |
PRMN | - |
PiMo | - |