NONHSAT129385
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129385 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
572 nt |
Genomic location |
chr8-:141678388..141685878 |
Exon number |
4 |
Exons |
141678388..141678523,141679826..141679834,141684397..141684503,141685559..141685878 |
Genome context |
|
Sequence |
000001 aagaacattT TAAATGGGTT ATGACCACTG TGTTTGTGGT TCCAGAGTGT CCCATGCTTG CTTCTCTCAC AGCCCTTTCC 000080
000081 ACACATGCTA TTGGCATCAT TTGCTTATTT GCCTGATCCC CCACCCCAAC TGAGACCTTA TGCAGAACCC TGTTTTGTTC 000160 000161 ATTTTGATAC ACTAGAATCT AGCCTAGAAG TTCAAGGGGG TGGATAGACA GGGTGGGTGA GAGAGGTCAT TGCCCAAGTG 000240 000241 TATATACCAG TGCATTGACT GAACTTTTCT TTTCCCACAG ATTGGAAACC AACATATATA TCAGCCTGTG GGTAAACCAG 000320 000321 ATCCTGCAGC TCCACCAAAG AAACCGCCTC GCCCTGGAGC TCCCGGTCAT CTGGGAAGCC TTGCCAGCCT CAGCAGCCCT 000400 000401 GCTGACAGCT ACAACGAGGG TGTCAAGCCA TGGAGGCTTC AGCCCCAGGA AATCAGCCCC CCTCCTACTG CCAACCTGGA 000480 000481 CCGGTCGAAT GATAAGGTGT ACGAGAATGT GACGGGCCTG GTGAAAGCTG TCATCGAGAT GTCCAGTAAA ATCCAGCCAG 000560 000561 CCCCACCAGA GG |
Predicted Small Protein
Name | NONHSAT129385_smProtein_20:115 |
Length | 32 |
Molecular weight | 3250.9537 |
Aromaticity | 0.0645161290323 |
Instability index | 41.9967741935 |
Isoelectric point | 5.22210693359 |
Runs | 7 |
Runs residual | 0.0245295698925 |
Runs probability | 0.0394049511698 |
Amino acid sequence | MTTVFVVPECPMLASLTALSTHAIGIICLFA |
Secondary structure | LEEEEELLLLHHHHHHHHHHHHHHLEEEEEL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHHL |
PiMo | oooooooooooTTTTTTTTTTTTTTTTTTTi |