NONHSAT129386
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129386 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
538 nt |
Genomic location |
chr8-:141696969..141712814 |
Exon number |
3 |
Exons |
141696969..141697228,141710990..141711121,141712669..141712814 |
Genome context |
|
Sequence |
000001 ATTCACAGGT TTCTGGCTAC CCTGGTTCAC ATGGAATCAC AGCCATGGCT GGCAGCATCT ATCCAGGTCA GGCATCTCTT 000080
000081 TTGGACCAAA CAGATTCATG GAATCATAGA CCTCAGGAGA TAGCAATGTG GCAGCCCAAT GTGGAGGACT CTACAGTATT 000160 000161 GGACCTGCGA GGGATTGGGC AAGTGTTGCC AACCCATCTG ATGGAAGAGC GTCTAATCCG ACAGCAACAG GAAATGGAAG 000240 000241 AAGATCAGCG CTGGCTGGAA AAAGAGGAAA GATTTCTGAT GCAGTGTGGG AAAACAGTCT TGTAATTGAA CTCATTTGCT 000320 000321 ACTTTGGCAA GACAGCTAAA TCCGTATAAG CCATATTCTG TCAGAAAGCC GCAAGTAATG CCTGATATTT TTATCCTGGG 000400 000401 GTTGCGGGTA TCTCAGTGAA GAAGAAAGCC ATCTGTGCTA CTTGGAATAG AGGTAAAGTG CAGGTTCTCC AGCACTGGGT 000480 000481 GGGCCAGTGC AGGTACCAGT CTGTAAGGTG TGCGTGTGTG GAGAGGAATG CAGTTCTT |
Predicted Small Protein
Name | NONHSAT129386_smProtein_44:304 |
Length | 87 |
Molecular weight | 10110.3327 |
Aromaticity | 0.0581395348837 |
Instability index | 61.6569767442 |
Isoelectric point | 4.63079833984 |
Runs | 8 |
Runs residual | 0.0465984033322 |
Runs probability | 0.0447911146441 |
Amino acid sequence | MAGSIYPGQASLLDQTDSWNHRPQEIAMWQPNVEDSTVLDLRGIGQVLPTHLMEERLIRQ QQEMEEDQRWLEKEERFLMQCGKTVL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLHHHHEEELLLLLLLEEELLLLLLLLLLLLHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |