NONHSAT129611

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT129611

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

817 nt

Genomic location

chr8-:144702808..144715013

Exon number

2

Exons

144702808..144703070,144714460..144715013

Genome context

Sequence
000001 CCCGGTCCAA GCCACACAGG AAGCCCACAC TGGCTTCTGA GCAGGAGTGT AACAAAAGCC AGATGACACT GGAAAGACAC 000080
000081 GTTGGCTGCG TGGTGACCAC AGAGGACAGG GTGAGGACGG TGGCAATGGC AGCCACACAG CAGAGCACCT GGGGTGAGAC 000160
000161 TGGACCGAGC CAGGAAGAGG CAGGGACTGG CTCTGAAGGC CGAGGGAGGG TTCACAGGAG GGTGGGGAGT GGGCAGGAAG 000240
000241 CTGACATCCA TGGTGACGCA GGGTGGGGCA GGTGGGAGAA AGGTGAAAGA AGAACAGAAG GTCACTTTGG GATGTAAGTT 000320
000321 TGAGACCTTG CTGCTAAGTG AGGCCAAAAA ATTAAAAGAT TTTTAAAATC TGCTGGTAGC TGGAGAAGGA CCCGAGACGT 000400
000401 GCAGATGGGA GTTGTGGCAG TAGTGGCCAT CTTGAGGGAC AGACACCGGG AGAAAACGAG TGATGCGTGC AAGGAGGGGC 000480
000481 ATCGCTGAGC CCACACAAGA CTCAAGATGG ATGAGACAGA GGCGGCCTCA GGTGCCTGCA GGTGGAGAGA GAAGcactgg 000560
000561 gaagcctgaa ggagcatgag aaagactgtT GCTGTAAGAC ACGGCGCTAT ctatggcctg aatatttgtt atctgttgaa 000640
000641 atcctaaccc cgaaggtgat ggtatgagga ggtgaggact ttgggatggg atgactgctc tcataaagga ggctagagaa 000720
000721 aggctcctgg ccctttccag caggcgagga cacagatgcc atcttgaacc aggaagtggc cacaccagac acggaatctg 000800
000801 ccagcacctg gttcctg
[back to top]

Predicted Small Protein

Name NONHSAT129611_smProtein_62:316
Length 85
Molecular weight 9165.8838
Aromaticity 0.047619047619
Instability index 46.130952381
Isoelectric point 6.05474853516
Runs 15
Runs residual 0.0445859872611
Runs probability 0.0406229759171
Amino acid sequence MTLERHVGCVVTTEDRVRTVAMAATQQSTWGETGPSQEEAGTGSEGRGRVHRRVGSGQEA
DIHGDAGWGRWEKGERRTEGHFGM
Secondary structure LEEEEEEEEEEELLLLEEEEHHHHEELLLLLLLLLLLLLLLLLLLLLEEEEEEELLLEEE
EEELLLLLLEEEELLEEEELLLLL
PRMN -
PiMo -