NONHSAT129822
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129822 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1191 nt |
Genomic location |
chr8+:145926069..145933440 |
Exon number |
2 |
Exons |
145926069..145926113,145932295..145933440 |
Genome context |
|
Sequence |
000001 CCGGGTCTCT GCAGGATGTG CGGTCGCGGG TCGGAGTCTA TAAAGATTCC TAGGTCAAAA CAAAGCATAA ACAATCAACG 000080
000081 CCAACAGAAA AATCTTCCGA AGAACAATTA CAAGAAGTAA CTCAGGAAAT TTTCCCAAGA GGCAATCCAG AAGAGTTTGA 000160 000161 GTTTCGATCA GCTTGTAGGA CTGAGACAGG AGCAGAACAT TGCTGGAAGA AATTCACAAT ACAGACCAGG ATGAAGTTAT 000240 000241 TTCCCCAAAA GAGAGGTTCG AGGCAAGTGG TCAGCTCCCC GTTGAAAATC ATTGTAGCAG ACAAATACCG GGAATGTAAT 000320 000321 AAATTGGAGA AAAGTTTGTC TCTGGGCACA AAGCCTGTTG TACCTCTGAG GGACAGGCCA GGAAAGAGAG CCAGTGGATG 000400 000401 GAGGATGGGT GGCTGAGGCT TTCCATGTGA GTCATATCTG AGTGGACATC GGGCAGTTAC CAGTGGGACA AAGCCCCATG 000480 000481 GATGCCATGT GTATGGGAAG TCTTTCAGCA AGAACTCACA CCTTACTTGG CATCAGATAA TTCATACTAC AGAGAAGCCC 000560 000561 TGTGTATGTA TTGAATGTGG GGAAAAAAAC ACAACTCAAG CCTTATACAT CATCAGAAAA TTCACCATGG atggtgaaac 000640 000641 cctatctcta ctaaaaacac aaaaattatc tgggtgtggt ggtgtatgct ggtaatcctg gctactcagg aggctgaggc 000720 000721 agaagaattg cttgaaccag ggaggcggag gttgcattga gctgagattg cggcactgca ctccagcctg ggcgacagag 000800 000801 tgagactcca tctcaaaaga aaagaaaaga aaagaaaaTT CATGGTGGAG AAAAACCCTG TGTGTGTAGT GAATGTGGTA 000880 000881 AGGGCTTTAG GGAGACATCA AAGCTTGTTA AACATCAGAG AATTCATACT GGAGAAAAGC CCTATAGGTG GGATGAATGT 000960 000961 GACAAAGCCT TTAGTGGGAA TTCAAACCTT ATTAAACACC AACTGATACA TACTGGAGAG AAGCCCTATA AATGTATTGA 001040 001041 GTGCGGGAAA GCCTTTAATC CGAAAGCAAA TCCCATGCAA TATCAGAGAA TTCATACAGG AGAGAAACTT TTTGAATGTC 001120 001121 AAGAGTGTGG AAAAAGCTTC AGTCAGCCAT CACACGTGAT TCATAATCAA AGGAAGCATG CTTGAGAGAA G |
Predicted Small Protein
Name | NONHSAT129822_smProtein_230:415 |
Length | 62 |
Molecular weight | 6852.0723 |
Aromaticity | 0.0491803278689 |
Instability index | 50.8770491803 |
Isoelectric point | 11.0629272461 |
Runs | 11 |
Runs residual | 0.0275108347466 |
Runs probability | 0.0373608903021 |
Amino acid sequence | MKLFPQKRGSRQVVSSPLKIIVADKYRECNKLEKSLSLGTKPVVPLRDRPGKRASGWRMG G |
Secondary structure | LLLLLLLLLLEEEELLLLEEEEELHHHHHLLLLEEELLLLLLEELLLLLLLLLLLLLLLL L |
PRMN | - |
PiMo | - |