NONHSAT130049
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT130049 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1108 nt |
Genomic location |
chr9-:4258129..4259207 |
Exon number |
1 |
Exons |
4258129..4259207 |
Genome context |
|
Sequence |
000001 GGGTGAAATC TGAAGTTTCT CCATATTACC AGTTTCTAGG TTTCTGAGTC TTGCAGAATA CTAAAAATGT TCATCTTGCA 000080
000081 ACAAAGAGAT AAGATCCAAG TGGTGAGGTC TTCATTAATT AGAGAAGTAT CTGGAATGTT TGGGGAGGAG TTATGCAGGG 000160 000161 AGGCAGCAGC AGGCAGGAGA TGGCAAACCC ACAAGGGTCC ATTGGCGTTT CTGGAGTAAA ATGGTTTGCT AGGTTATTTC 000240 000241 TGGGGCTTTG TGATAGTAAA GTCTGAAAAA CTGTGTTTAT AAATACGATT GGAAAAGTAC AGAGGTTGAA TTATTGCCAC 000320 000321 ATGTTAGGAA TGTGGAAGGT TGCTTGGATA AATGAGAAAA GAAAGAAAAG AATGCAAGTA ATGTCCTGCT GGGGTAGTGC 000400 000401 AGTATTTTGT TTCCAGGTAG CTTCAAAGTA TTAAATATAT TTACATTGAC CCATGTAGCT AGCAATTAAT AAAACAAATC 000480 000481 AATAAATGAG AACATAAGAT CACCCCCAGT TCTGCCACTC AAAACTAACT GATGTTTCTG AGGTTTCTAA GGGGTGATTT 000560 000561 ACAAGTGAAC ATGGTTCCCC TTGGTGATGA TGTCCTCAAA AGCAAAGGCC ATCTTCCAGA TATGTGAATT CTTTACCCAT 000640 000641 TATGAATCTT GTTTTGTTAA AGTAACTTTT TCTTTTAGGA TAATTTTAGA TTTACAGCAA AGTTGCAAAG ATAATAGGAA 000720 000721 GACAAAGCCC CAAAGACAAA TTCCCAACAC TTCCTAGCAG GCCAGTTCTC TGACTAAGGT AACTGAACTT TAAGGTATTT 000800 000801 CCCAATACCG TCTTACTCAC CAATATGACC TAAATTACCT TATATTACAT TTATCAAAAT TAAGAAACCA GCATTGGTAT 000880 000881 ATATATGTTA CTGTAAACTA AAACTGTAGA CTTTATTCAG ATTTCACTAT TCTTTATGGA TCTTTTATGT ATGATTTTAA 000960 000961 GTCCTTTTTT GAATTCTGAT ATTGTCTCTA GTACCTCTTT ATTTAAATAA TGTTGTTTTC CTCCCTCTGA AAACAAAAAA 001040 001041 GACGTATTTT TTTTCATTGT AGAATTAGGA AAGTACCGAA AAAAAAAAAA AAAAAAAAAA AAAAAAAA |
Predicted Small Protein
Name | NONHSAT130049_smProtein_320:433 |
Length | 38 |
Molecular weight | 4429.3509 |
Aromaticity | 0.162162162162 |
Instability index | 43.227027027 |
Isoelectric point | 10.042175293 |
Runs | 6 |
Runs residual | 0.017604760724 |
Runs probability | 0.0214773597126 |
Amino acid sequence | MLGMWKVAWINEKRKKRMQVMSCWGSAVFCFQVASKY |
Secondary structure | LLLHHHHHHHHHHHHHHHEEEELLLLEEEEEEEEEEL |
PRMN | - |
PiMo | - |