NONHSAT130060

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT130060

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5494 nt

Genomic location

chr9+:4483537..4489030

Exon number

1

Exons

4483537..4489030

Genome context

Sequence
000001 gtgaaacccc atctctacta aaaattcaaa aaaattagct gggtgtggtg gtgcacgcct gtaatcccaa ctactcaaga 000080
000081 ggctgaggca ggagaatcac ttgaacctgg gaggcggagg atgcagtgag ccgatatcat gccactgcgc ttcagcctgg 000160
000161 gcaacacgag tgagacttcg tcttgggaaa aaaaaaaaaa aaaaaGAGGT GTtggttaag tgcacaaatt ctagagccag 000240
000241 accatctggc tcaacccttt ctcctcctgt tactgacagg gaaaacttac acaaggagct gaatcttttt gtgcttcagt 000320
000321 ttcctcagct gtaagataat gatgataaGC CATCATATCT CATTTGATTC TTCCAGCAGC CTCatgaaga aacaataatc 000400
000401 ctcacctcac tgagatactg agaggaccaa gtgaattagt ttgggccaag tgcttagaag agcgcctggt atataagtgc 000480
000481 tTTGTGTTTG CTTTTGTTGT TGTTGTTGTT ATTACCAGCT AAAATGGAAC TTCTATGTAG CAATAGTATA AATATAGTTT 000560
000561 AAAATCCACT TGGCCCGCtg aaattgcctt tgcaaaatta taacagtaag agaaatctga catagctgac tctacttggc 000640
000641 ttctaacctc taagctatcc ttgttcattc ctgggcataa gccaaactaa cttttttttt ttattttttt tatttttttg 000720
000721 agacggagtc tcgctctgtc gcccaggcta gagtgcagtg gcatggtcaa gactcactgc aacctctgcc tcccaagttc 000800
000801 aagcgattat cctgcctcag cctcccgagt agctgggacc acaggtgtgt gctaccatgc caggctaatt tttttttttt 000880
000881 tttttttttt tttttttttt gagacagagt cttgctctgc tgcctaggct gcagtgcagt ggctcagtct cagctcacct 000960
000961 taacctctgc ctctcgagtt caagcaatta tcttgcctca gcctcccggg tagctgggat tacaggccct gccaccacac 001040
001041 ctggctaatt tttgtatttt tagtagggac aggtttcacc atgttggcca ggctaggctc gaactcccga cctcaggtga 001120
001121 tccacccacc ttggcctccc aaagtgctgg gattataggc gtgagccact gtgcccagTG taggccaaac taactttagg 001200
001201 aggaagttat agtttaacct taaagtaaag atagtaatag cccttcccaa aactatccct tcctcattgg aggtcaggaa 001280
001281 tcgtctttgt agaaccaatg aaaagacaca agattaggat tatgaaggga gcctgaattc tgctaagttg taggcataaa 001360
001361 ttataaccaa ccatcggtcc agaggacaca agatttgtaa cttctccaat ttactcctgt agataacatc atcattattg 001440
001441 tagaacctaa gattggtttt ctttttcctt tttttgGGGG GGTGGGGGTG GTGGGgggac agggtttcac tcccgtcgac 001520
001521 caggctggag tgcagtggag ccatctcggc tcactgcaac ttctacctcc tgggttcaag cgattctcct gcctcaggct 001600
001601 cccgagtagc tgggattaca ggcactcacg accatgccca gctaattttt gtatttttag tagagacagg gtttcaccat 001680
001681 gttggccagg ctgttcttaa actcctgacc tcaagtaatc catcctcctc ggcctcccaa agtgctggga ttacagacgt 001760
001761 gagccaccgc gctcagccct aaggttggtc ttctgagatg tttttcagac ttggatttct gaggactggc tgactacact 001840
001841 cagatccaca aatcaaccag tcctgtagcc ccaccccaga gaccgactct gcataaggac cactttccac acccctgtga 001920
001921 tttcatcttc atccaaccag cagcatctgt tccctaaatc ctgactacca agttattctt aaaaactcca gcctccaaat 002000
002001 ttccagggag gctgatttga gtaataactt cctgtctccc catgtgacta gctttgcatt aattaagctc catctttaca 002080
002081 acaataccag tgtttcagtg aatcagctct acctgtgcgg caggcaagaa cccatcaggg gattgcaCTA CCAGTGATCT 002160
002161 ACTTTTGAGA CTCCTGCCTC TGCttttttt tttttttgag acggagtttt gttcgctctt gttgcccagg ctggagtgca 002240
002241 atgtcgcaat ctcagctcac tgcgacctcc gcctccccag attcaagcaa ttctcctgcc tcagcctccc aagtagctgg 002320
002321 aattataggt tcctgccacc atgcccagct aattttttgt atttttagca gagatggcgt ttcactatgt tggccaggct 002400
002401 ggtctcaaac tcctgacctc aggaatccac cccccttggc ctcccaaaga ggtgggatta caggcgtgag ccgccgcacc 002480
002481 tggccCGACT TTTGCTTTTA GTCGGGGAGa tttttattat ttcaaaatgt ttgtatatat tgaaattttt aaaatctttt 002560
002561 atattGTACT ATTTTCAATG CATAATTTAA ATGAACATAA AACAAGTATG CACTATAGGA GCTTTAGGtg ttgttgggct 002640
002641 cagaatccaa taccccaaaa tatggcattt tgacatgttg acatggagaa acctcaaggt ctctctgact tcccctgcca 002720
002721 ccgtctccca caaagaagtg gaagttcctt tatctgcgta agattcagac ccatcaaaga aagtaattgc ttgttcttcc 002800
002801 cctccctgta agaccaagaa tgtaaccaca cctgaacact ttcactatca aagagaacta ttcacacatt aatctctgtt 002880
002881 cagagatcca ttcattctcc ctagtaatcc cctcagcaat tcctcttctc ttcacctccc aaaacctgtt ttaccaggat 002960
002961 tcaagccccc attctttctg taacctccag atagtatata aacttctgga cctcattggg aggctaggtc ttcattttga 003040
003041 agtctcccgt gtgtatacgt tcaatacatt ggtatgcctt ttctcctatt aataaatctg cctgtcagtg attttgaagc 003120
003121 aaaccttcag gggaccaagg gccttggtcc tcccaGTGTG AAAGTGCAAT GGGTGATGTA AGGCCTCTtg tcacccaggc 003200
003201 tggagtgcag tggtgcaatc atagctccct gcaacctcaa actcctgggc tcaagccatc ctcttgcctc agcctcccaa 003280
003281 gtagtgagga ctacaggcat gtgccatcat gcccaggtta tttatttatt tttttaagtt ttgtagagcc aagatttcac 003360
003361 taagttgccc aggttggtct caaactcctg gcttcaagtg atacttctgc ctcagcctcc caaagtgctg ggaatatagg 003440
003441 tgtgagtcga cactcccggc TCTATGGTAG ACACTTTGGA AATGCAAAAA GTAGAAGGCA AAGAAGACCA TTGTTAAAAT 003520
003521 TTTGACATAT TTCTTTTGTC ATATTctcca cctactgggt tcaagcgatt ctcctgcctc agcctctcga gtagctggga 003600
003601 ttacaggcac ccgccaccac gcctggctaa tttttgtatt tttagtagag atgggCAATT CCTGATGATC AATGAGCAAG 003680
003681 AGTTCTCGTG GGTCTGAAGG GGTTCAGAGT GTGTTAATGA CAGGCAGGTG TTAAAAGATG GTGTTAAGAG ATGCCTGTCC 003760
003761 AGGTTGACTC CAAGTAAAAT TGGTGGTGAT ATttgttttg tgccagggag tgttctaagc ctttcacaca gattattgta 003840
003841 ttaaattatt aaaatacctc catgaggtaa agataattaa tgcccccatt ttacagatga agaaactgag acataaaaaa 003920
003921 tttaagccag gtgcccaagg tcaccaagct gataagtggt ggtgctggga tttaagccta aatactttac cccgagaacc 004000
004001 cTAGTGTAAT TGTCTTATTA CAACCCAGAA AGTTGTGATG TACACATAGT TCCTCAGATG CTTCCACTTT TTTCTCCCCT 004080
004081 CAGGAATGTT TATTTTGTAA ATACTGCCCT ATCTACAACT GTAATGAGCA TGGGTATGCT TATGGTCAAC ACtttttttt 004160
004161 ttttttaaat agatagagtc tcgctctgtc acccaggctg gagtacagtg gtacaattat agctccctgc aacctcgaac 004240
004241 tcccgggctc aaactatcct cttgcctcag cctcccaagt agcagagact acaggcatgt gccatcatgg ccagattatt 004320
004321 attattatta agttttgtag aatcaagatt tcactaagtt gcccaggttg gtctcaaact cctagcctca agtgatcctt 004400
004401 ctgcctcagc ctcccaaact gctgggaata taattgtgag ccaacacgcc cagcTCTATG GTAGACACTT TGGAAATATA 004480
004481 AAAGATAGAA GGCAAAGATG ACCATTGTTA AAATTTTGGC ATATTTCTTC TGGTCTTTTT TTCTAAGCAC ATGGTTTTAT 004560
004561 TTCGTCTGTT TGTTGGTTGG TTGGTCGGTT TAGtttttgt agagacagtg gtctaattat gttgtccagg ctggtcctaa 004640
004641 actcctgggc ttaagcagtc ctaccatctc ggcttcccaa agtgctggga ttacgggtgt gagccactgc acctggccAa 004720
004721 tatgtttatt ttacacacat gtgatcaaat tgtacatgca attttagtat ttctttcttc cctttatatt tataaatata 004800
004801 gatttataac atgtgccatc ccatgctgtt aaaaacttca taaacttcct ttatgtaggc tgcataaggt actgttgctt 004880
004881 ggcagttcca taatatattt accattccat ttatgttgga catttgcgtt ttttccagct gtttttttac tgtGGGACAA 004960
004961 ATCTGTTCTC TCGCGCACGC TCTCTCTCtt ttttttttat gagacagggt ttccctccgg tcgcccaggc aggagtgctg 005040
005041 cagcgtgatc tcggctcacc gcaacctcca cctcctgggt tcaagtgatt ctcctgtctc agcctcccga atagctggga 005120
005121 ttacaggtgc atggccctaa acccggctaa tttttgtatt tttggtagac gggatttccc catgttggcc aggctggtct 005200
005201 cgaactcttg acctcaagtg atccgcctgc cttggcctcc caaattgctg gaattacagg tgtgagccat cgcgcccggG 005280
005281 ACTATTCTCC CTTTCTTGAT AGTTTCCCTT CTGACATTTC CTTCCttctt tctttctttt ttcttttttt ttgacagtct 005360
005361 cgctctgtcg cctaggctgg agcgcagtgg cttgatctca gcttactgca atctccacct tccaggttca agcgattctc 005440
005441 ctccctcagc ctcccaagta gctgcgacta caggcacgtg ccaccacgcc cggc
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Predicted Small Protein

Name NONHSAT130060_smProtein_2240:2500
Length 87
Molecular weight 9136.1189
Aromaticity 0.0813953488372
Instability index 70.3197674419
Isoelectric point 7.71636962891
Runs 11
Runs residual 0.0117146824019
Runs probability 0.0435355141237
Amino acid sequence MSQSQLTATSASPDSSNSPASASQVAGIIGSCHHAQLIFCIFSRDGVSLCWPGWSQTPDL
RNPPPLASQRGGITGVSRRTWPDFCF
Secondary structure LLLLEEEELLLLLLLLLLLLHHHHHHHHHHHHHHLEEEEEEEELLLEEEELLLLLLLLLL
LLLLLLLLLLLLEEEEELLLLLLLLL
PRMN -
PiMo -