NONHSAT130152
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT130152 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
553 nt |
Genomic location |
chr9+:6704339..6704977 |
Exon number |
2 |
Exons |
6704339..6704366,6704453..6704977 |
Genome context |
|
Sequence |
000001 CTCAGGTAGA ACAGTCTCAA ATCGCACCGG CCGGGACCAG GCAGCCAAGA AACGCGGAGA CAGACTACTG GGACTGCGAC 000080
000081 GTCTCCTCTC CTGTTCGCTG CGATATGCCG GCGTCGTGTT GAGCGGGCTG CGGACACAGA CAGCCTGCCC GGCCCCACTG 000160 000161 AGTGTTTGAT CCCCATCCTC GCAGCTCTCT AGAGGACCAG AGTTGGCGGT GCAGCCCAGC GGAGCTTCGG TGGGTGCGGA 000240 000241 TGTCACTAGA TGACAGACCC AGCCCTGTCC CTCAGCCCTC AGGGCCCTTT TCCCAAAGCC TACAGCCGCA GAAAGTTCTC 000320 000321 TTAGGATATC CCCAGACCCT GCAGCCAGCT TTTCCATTTT TCCTTCCTGG GGCCAGTACT TTCTACAGCG TCTACAGCCA 000400 000401 AAGTATCTTA TCCCAGGAGG GCCTTTATAA CCATCTGCGC CTTTGGGACT TTTCCCCACT TGTTGAAATC CATGGTCTTG 000480 000481 GCCTTTCTAG TAGCCTGTCT CTCACGCTTA AGATAGTACA TGCCTCCCAT CTGTAAAAAT GGATCATCCg ccg |
Predicted Small Protein
Name | NONHSAT130152_smProtein_239:535 |
Length | 99 |
Molecular weight | 10810.2206 |
Aromaticity | 0.112244897959 |
Instability index | 89.0582653061 |
Isoelectric point | 6.37261962891 |
Runs | 13 |
Runs residual | 0.00638947167652 |
Runs probability | 0.0345005639124 |
Amino acid sequence | MSLDDRPSPVPQPSGPFSQSLQPQKVLLGYPQTLQPAFPFFLPGASTFYSVYSQSILSQE GLYNHLRLWDFSPLVEIHGLGLSSSLSLTLKIVHASHL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLEEEEEEEEEEELHH HHHHHHHHLLLLLLEEEELLLLLHHHHHHEEEHHHHLL |
PRMN | - |
PiMo | - |