NONHSAT130178

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT130178

Source

NONCODE4.0

Same with

,

Classification

sense

Length

547 nt

Genomic location

chr9-:7798199..7800148

Exon number

2

Exons

7798199..7798637,7800041..7800148

Genome context

Sequence
000001 AGGCCTCTGG ATAGGAGATA TGACATGCCC AAGGTCTCGC AGTTCATGTG AGGCAGGAAA CTTAAGAGAG CCAGACTTCT 000080
000081 TTAAGGAGAC TGAAAGGTGA TTCATTTAGC ATTGCCACCT GGGGTATCGT TGTCATGGCA GACCCCAAAG GGAAGGCCTA 000160
000161 CCGCGTTGTT TGAAAGTACC ACCAGTGAAT CTGTCTTCTG TCTCTGTCCC TTTCCCCGTG ACACACACAG CAGGCATGGA 000240
000241 ATTTAATGGG TGTTCTGGAC AGACACTTGT ACATGGACAG ACATCACTAC TGTGGATACT ACAAGACTGA GAAGAAAATC 000320
000321 GTATGTTGTC ATTCTCTGGC TATGGAGTGT TTGTGGCCTT CACAGATTTC ACAGGAACCA ATAAATCCCT CAGAGAAGTA 000400
000401 AACAGGTTCT TTGTCTTATC TGGGGAAGGA AAGTATAACT TATATTTAAA TATAATTGCT TAATTAAGCA TTATATATAA 000480
000481 ACATAATAGT ATGTCTTATA TAATTGCATG TCatattata tataataaac ataaatatgt ttagtta
[back to top]

Predicted Small Protein

Name NONHSAT130178_smProtein_245:400
Length 52
Molecular weight 6069.9916
Aromaticity 0.0980392156863
Instability index 82.131372549
Isoelectric point 6.87872314453
Runs 7
Runs residual 0.0169869928169
Runs probability 0.0129709541474
Amino acid sequence MGVLDRHLYMDRHHYCGYYKTEKKIVCCHSLAMECLWPSQISQEPINPSEK
Secondary structure LLLLLLLLLLLLLLLLLLEELLLEEEEEEHHHHEELLLLLLLLLLLLLLLL
PRMN -
PiMo -