NONHSAT130279

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT130279

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2322 nt

Genomic location

chr9+:15874539..16061661

Exon number

10

Exons

15874539..15874661,15920268..15920420,15922109..15922200,16020587..16020792,16022330..16022583,16022737..16022906,16035455..16035523,16036091..16036204,16042796..16042918,16060644..16061661

Genome context

Sequence
000001 CAGATCTCGC TGTCATGGTC TGCGGCAAGT AGGAATGACT TCACCCTACA GCTACCCAAA CTGCACCTGG AGACCTTTGC 000080
000081 AATGGAGGGG CTCAAGGGCG GGCCAGAGGT GGTAGCATGC CAGGCTATGA TTAAAAGTTT CATGGATGTC TACCAGCTTG 000160
000161 CAAGCACTAG AATCATGACA TTAGAGAAGG AAATGACATC TCATCGAAGT CACATTGCAG CCTTGAAATC AGAACTTCAC 000240
000241 ACAGCTTGTT TACGTGAAAA TGCAAGTTTA CAATCAGATA CATTCATCAT TTCATTTAGA AGAGATGGTT CACCCTGTAG 000320
000321 TGATTCTTCA TCTATAGAAT GCGAAACATT CCCCCAGGTG ATTCTGATca gcactacgtt tgcactttgg agctatgatt 000400
000401 gagtaaaata aaagttactt gaacacaagt actgtgacat ggcaaccaag atggctactg agtgacacac aggcagggag 000480
000481 cttacacacc gtggatacct ggacgaaggg aggattcagg tcccaggtgg gatggtgccg gatagtgtga catttcatca 000560
000561 tgtgcctccg aatgGATGGT ATTATCATGC TAATGTCTGC AGAGAAGGAA GCACAGATTA GGTGACTGTG GCTACTATGA 000640
000641 GGGCCAAGGA GGCCCTCCCA CCCATCCTGT GGGATGCACC ACCTGCGCTC ACTAGGCCTA TGGAGAGGGG AGTGACTGGG 000720
000721 GCACCTGCTC ACCCCTGTAC CATGCCTGTT CTTCAGCTTC AGCTCTGGAT CGCCCAGAGA GGGACTGCTG CCTGCATCTG 000800
000801 GGTTCCTGGA CAAACATGCA GTCTACCAGC CAGCGTGTTC TCCAAAAAGA GGAAAATGAG TGTTCTGCTC CCAAGAGATC 000880
000881 ACGGAGTCCA CCTGAGTCCC ACCAGCCGAG TCATTTGTCT GCTCCTGTAG CATTTACCTT TATAGTGCAA AACCTCAGGG 000960
000961 TGCTGGCATT TCAGCCACAT CCAGGAGGTT GATGCATGGA TCTGTGGCGA ATGTCACCAC CTGTGACAGC GCTCTTATTT 001040
001041 ATGAACTGAA GAACACTCTC CATCTTGGCC CTCTTGCCAG AAAAGTTCTT TCTCCACAGA CCAACAGGAA GTTCCCTAAG 001120
001121 TACTATGAGA CCTTGTCTTT GCCTATAGCT GGCTGCATTG GACATGGATT CCTGGCCCAA GTTCATTAAA GAAGATGAGG 001200
001201 GAAAATAAAC ACACATGTAC ACGCACACCA GATAAACTGA ATGCTTCCTT CTGCTGGGGA CACGCTGTAG GTGAGCAAGT 001280
001281 GCACCAAGGA CAAGGCGGCC ACTGATGAAA AGGAAGGGAA AAGAGACTTC ATTTCCATAC CCACTAACCA TGCCAACAGA 001360
001361 AGGCTTTGTG AAGAAGGAAG TAAAAGCTAT CGGTAGGAGT TAGAAAAAAA CATTTctagt tacaagaaca gcagaaaaag 001440
001441 acctgaactt cagagtggac cacaaatgaa tatgaattaa taacacagat ctcttttcaa aagccaacac aaaatgagga 001520
001521 tgtgttTTTT GCAAAAGCAG TTGTTCTTGC CACTGGGCTT ATGCTTGTCA TTCTTTCATG TGTCACAGCC AGACCTAGGA 001600
001601 AATTCCCTGG AAAGTCCCCT CCATCACACA CCTGCAGTTT TTCCATTTGA GTGTAATTCT GTTGGACCTT GAAAGACTTT 001680
001681 TTGATCTTTG GGACGCTCTT ATCACCAAAT GTATCTTTCT GCAGGAAGAA GACagaagaa aggggtggac tatgagatgg 001760
001761 gagcctgggt cccaatttca gttcaaccat taccaaccag gtggctttag gcaagtctgg tcatttcctt tgcctcagtg 001840
001841 gctttctata aaatgGAATT CTATAGGGAT GATGAAAGCG AAAACGTTAG CCACTATGCT TGCTAGTGCT CAAGAAATGA 001920
001921 TTCCTTCCTG CCTGCCTgcc tcagttttcc atctgtaaac aaggattcaa ctagaacatc tttgaggttc cttgagctct 002000
002001 aacactctgt gattctgtTG GCAGCACCTT AAGAAATTTA CAACAAACAC TCCATTGAGT CTTAATCTAT TAGATCCCAT 002080
002081 TCAGTTCTAA TAGTGTTGtg attttgactt tgtagcctca tgtttatttt ctctcttcct gattttttat ttatatattc 002160
002161 tatttaatag tttttgcttt ttcaagttgt caccagttct ttgtagaata agaaaaaagt ataactaaCT GGAGGAAAGA 002240
002241 ATGCATTCAC AGAAAGCCAA GGAATGATAA CACTAATGCT AATACAATAC TACTGCTaat aaaaataact gcctttattg 002320
002321 aa
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Predicted Small Protein

Name NONHSAT130279_smProtein_1751:1957
Length 69
Molecular weight 7842.1105
Aromaticity 0.147058823529
Instability index 62.4338235294
Isoelectric point 9.62481689453
Runs 8
Runs residual 0.022853736089
Runs probability 0.033441529765
Amino acid sequence MRWEPGSQFQFNHYQPGGFRQVWSFPLPQWLSIKWNSIGMMKAKTLATMLASAQEMIPSC
LPASVFHL
Secondary structure LLLLLLLLLLLLLLLLLLLEEEELLLLLLLEEEEHHHHHHHHHHHHHHHHHHHHHHHHHL
LLLLLEEL
PRMN -
PiMo -