NONHSAT130288

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT130288

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1705 nt

Genomic location

chr9-:16424469..16426173

Exon number

1

Exons

16424469..16426173

Genome context

Sequence
000001 AGATTTATTC TCAGTAAGTC CTTAAAAGAT GCCAGGGCTC ATGGCTTTGC TTTTTCTTAC CCAACAATAG TAGTAAACTG 000080
000081 AGCACCATAT GAGCTGCTTG ATTGAGAACA CTTCCAAATG CTGTGAAAAC ATAATCCTGT TCACAGTGTA ACACTCATCT 000160
000161 CACATTACAG CGCAACAGGT ACCTATTGAA TAATCAGCAC CCTTGAGAAG CCTCGATGTC TCAGATACAA CTCAAAAGTA 000240
000241 AAATGGTTAG GGAATGGGGC TGCTGGATAT CAATTCTACA CTTAACCTGT GCATCCAGCT ACACATTTTC CATCTACCAA 000320
000321 TCTGCCTTCC CAAATGCCAT CACTACATTA ACATTTTTTA TGCATTCCAC AGCAATGACA AATTGTTTTC TAACTGTAGG 000400
000401 GCCAGATTTA GTATGCGAAA GACATGTTTG CCTCTGCCAA CAAACCAATA ATTCTCACTA ACGTCTTCAG AGTTACAACT 000480
000481 TTTATAAAGT TGCAAAGTGG AGTAAACAAA CCATCTGTTT GGCTTTTCCA TATATGTCAT GCTTTCTTAT TAGCATATTA 000560
000561 CGATTCATTT AGTAAACAAA TTTGGTGATT TCGTTCACGT CAAAGTTAGA TCGGAAGCTT GAAGATGATT AACATTCCTG 000640
000641 GGACAAGCAC ATTAATACAT TGCTTCCCCT GCAAAGTTAA ATGGCTTCTC AGGAGAATCG CCCCTTGTTG ACAAGATGAG 000720
000721 ACTGTCAATT TTGTCTGCCT GCCACATTAG GGGCCATACG GGGATGGCAG GCTCTGAGAG AGGGGAGTCG TGTAGGCAGC 000800
000801 ATAATTCACT GTGAATTGAG AAAAGAAGTC TAATTCTGAT AAATGGTCGA CCCCAATACA TCCTACCTGT TATTACAACA 000880
000881 GACGTGCCGT ATCTGTGCAG TAAATTAGCT AAACCCCTAA AGAGTTTGGT AGGAGCTTAT CTTCAAGTGA ATAATTTGAA 000960
000961 TGTAGAGGAA ACTGTCTGCG TGACTAGTAT GGATGATTTG TTTTATATTG AAAGGGGTTG AAATGACTGA GTTTCATACT 001040
001041 TTTAATTTGC AAGAATTTGC TTAGATTTTG TTTCTTGCAT TTAATATGTA CTTCCTTACA TTTGGGGCTT TTTGAGTGTT 001120
001121 ACCCACTAGA ATTTCACATT GAATTTTCTT CCTGAGCTAG GGGATGGTTT TCAGATCTTT TGGACAGAGT CTTTAAATAA 001200
001201 TAACCTGTAG AACAACTACT AATTTTACAG AAAGGTATAG TGTCAAAAGT ATCATTTTGT GCACAGAGCC ATAAGCATCC 001280
001281 TATCGTTAAT AAATGATAAT ACAAAAATGT TGAGGTAAGT GTAATAGATA GTGTTGTAGC AATCCAGATA AGAAAAGGAC 001360
001361 TAATGAAGGC AGAAGTTTTA ATTTTTCATT TCTGTGGATT TTGATAGCAG GTTTACATTT CTACTCAAAA GTATTGTTGA 001440
001441 CTCAGTAGTC CTACAATGTA CTTAACCCTA GCATCTAGAC TTACCCAGAT TGGATATAAA TTTATCTCTC TCTCTCCCAT 001520
001521 TCTCCCCATA TACATATATG TACACACATA CATACAGACA AATAGGCATG CATATGGTAT GTATATGTTA TTGTTACGCT 001600
001601 ATGTATATGT TGTTATGATC ATTCTGTACA ATATCATTTG AGAATTTGTG AATGTGTGTG TTGAACGGCA GAGTTGAGCT 001680
001681 GGAAAATAAA GGCAAAAACT AATCC
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Predicted Small Protein

Name NONHSAT130288_smProtein_215:460
Length 82
Molecular weight 9224.6275
Aromaticity 0.111111111111
Instability index 41.8728395062
Isoelectric point 7.64459228516
Runs 15
Runs residual 0.0430054778841
Runs probability 0.0647647647649
Amino acid sequence MSQIQLKSKMVREWGCWISILHLTCASSYTFSIYQSAFPNAITTLTFFMHSTAMTNCFLT
VGPDLVCERHVCLCQQTNNSH
Secondary structure LLHHHLHHHHHHHLLLEEEEEEEELLLLLEEEEELLLLLLHHHHHHHHHHHHHLLLLEEE
LLLLLEEEEEEEEEEELLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLL
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