NONHSAT130787
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT130787 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1144 nt |
Genomic location |
chr9+:33709688..33712553 |
Exon number |
2 |
Exons |
33709688..33709866,33711589..33712553 |
Genome context |
|
Sequence |
000001 GAGAGAGGCC TCAGAGGAAG CCAACTCAAC AAATTTTAAA ATATGTATTT TGGAGAACAA AATTATTAGA AAATATTTAC 000080
000081 AACAGAAAAA AAAAATTTCT TCTAGAACTG AGCTGGTCTA AAGGTGCATA TCTTGGTAAG GCTCTGTGAA GAAATGACCT 000160 000161 AATCTGGAGA GAAGCTGTTC ATGTTGACAT TTAAATGCCA GTGTGGCAGT GTTGGGGGTG GGGTCTAGTG GGAGGTGTTG 000240 000241 GATCATGGGG ACAGATCTCT CATGGACAGA TTAATGCCTC CTCTCGGGAG TGAGTTTCAC TCTTACAGAC TTGGTTAGTT 000320 000321 ACCATGACAA CAAGTTTTTC CTTCTCATGT TTCATCTCTT TGGACATTCC CACTCCCCCA TCCATTTTCT GCCATGAGTT 000400 000401 GAAGCAGCAC AAGACCCTCA CAAGATGGGC TGCTCAGTTT GGGACTTCCT GACCTCCAGA ATTGTGAGCC AAATAAAATA 000480 000481 TTTTTTCTTT ATTAATTACA CAGTCTCATG TCTTCTGATA TAGCAACATA AAACAGACTA AGACAGGGTT CTCTAGGGTA 000560 000561 TGAGAGTATG AATAAAAATT TCTAATTTTC TGGTAATGAA GTATTTTGGG CAAGAATAAC ATGTATCCAG AAAGAACTCT 000640 000641 TGCAATGAGA AGTGTTTGCT GTCTTTCCTT TTGTTCAGGG ACACTGTCTT TGGGGACATA TTTAATTCCC AATAGAAGGA 000720 000721 AATGGCAATA ATGTATAGTT AGATAACACC ATCTTCGCTT CTTCATGCCC CCTTAAGATG TTGTTCACTC TTCCATTGCA 000800 000801 AACATCCAGA ACAAGGCAAG CATGGACTTC CTAGATCTGG GAGGAGAGAG AAAGGTACTG GTTGCTACCT AATACCATTG 000880 000881 AATATCTCAG AGCTGGGAGA AATTCCACTG AGTCTATGTC TGGAGACAGA AGTGACTGCT CCCTGGTGGG AAGCCAATCT 000960 000961 TAGCTCAGTT TGTCACCATA TTTCTGGGGG ACTACTGCAA GAGCCCCCAT CTGGTCTCTC TACCTTCAGA TTAGCCCAAT 001040 001041 CTGAACCACC CTTTACACTG CACTCAGAGG GATCTTCTAA AATGTGAATC TGATGACATT CTGCTTGAAA CCCTTCAAAT 001120 001121 AACCTTCTAT ACTCTTTAGG ATAA |
Predicted Small Protein
Name | NONHSAT130787_smProtein_323:451 |
Length | 43 |
Molecular weight | 4763.4302 |
Aromaticity | 0.142857142857 |
Instability index | 48.5738095238 |
Isoelectric point | 7.85736083984 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0388371564842 |
Amino acid sequence | MTTSFSFSCFISLDIPTPPSIFCHELKQHKTLTRWAAQFGTS |
Secondary structure | LLLLEEEEEEEELLLLLLLLHHHHHHHHLHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |