NONHSAT130960
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT130960 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
964 nt |
Genomic location |
chr9+:35646267..35647473 |
Exon number |
3 |
Exons |
35646267..35646298,35646311..35646430,35646687..35647473 |
Genome context |
|
Sequence |
000001 GAAAGAGGAG GGACAGCTGG GGCCCTAGGA GCTCTGTCCC TGGGAACGGG GCGCTAGGAC GGGCACTCCT TCTGGCTGGA 000080
000081 ATGCTACGCC GGTGAGGGAA AGGAGTCCAC TAGGGAAGTA CCTGGAGGTG GAGACGGGGA GAGAAATCAC AGAAACTCAG 000160 000161 TTTACAAACG ACTGCTTGGG AGCAGTCATG TCACCCAGTC CAGAGGGAGC CGGTCAGCTG CGTTCCGCGA ACTTGGGAGG 000240 000241 CGACTGCTGG GGTAGCGGCG GGGCCCTCAC TGCGCGTCGT CAGGGACCAG ACCCTGGGGT GGCCCCGAAG CGTCGAGACT 000320 000321 ACAACTCCCG GGATGCCGCG GGCCAGGCTG CATCCCGCCT GCGCAGAAGT GGTGGCAACT CCGCCCCTCG CCAGGCGGCG 000400 000401 GCGCTGCGGA CTCAGTCCTA AGCGGGCGAA GGCGGCGAGC GCCGTGGGTC TGGGCGGGCC AGGAGAACCG GGTGCTTCGA 000480 000481 GGAGATCTGC GGGCTGGGTT GGGGGCGTTT GAGCCCTTGG CTTGTCCCAG TGGGTAGGCG GGACTCCAAC CCCCGCCTCC 000560 000561 TCCAGGGTAA AGCTCTCACG TCCACCTGGC GCGACGCTGA GCCATCTTCA GAAGCACCGC AGCCCTCAGA ACCCCACATC 000640 000641 CCGCTGCCGG TGGTTCCCCG CATCCGGTGT CCGCCCCCGA AGCCTCCCTC CCTCCCTCCT CCGCATCCCC AGCTACCTGC 000720 000721 CCTTAACCGC GACCTGGGCC TCTCCTGGGG AGGCCCAGGG TGGGGTCCTC AGAGGTCCAG GGACCCAGGG GCATTTGTGG 000800 000801 GGTCTGTAGG GGGGTGGGCT TAAGGGAAGG GTGGTCCCTT TCAAATTGGG ACCACCAGGC AGGAATCAGG CGCACGGGTT 000880 000881 CCTCCTCTGT GGCTTCCTGT GGCACTCCAA GTGGGAAGAA GAGAAGCTTG GAAGTGAAAA AAAAAAAAAA AAAAAAAAAA 000960 000961 AAAA |
Predicted Small Protein
Name | NONHSAT130960_smProtein_332:511 |
Length | 60 |
Molecular weight | 5971.9137 |
Aromaticity | 0.0169491525424 |
Instability index | 94.5118644068 |
Isoelectric point | 11.9083862305 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0462437227143 |
Amino acid sequence | MPRARLHPACAEVVATPPLARRRRCGLSPKRAKAASAVGLGGPGEPGASRRSAGWVGGV |
Secondary structure | LLLLLLLLLLEEEELLLHHHHLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |