NONHSAT131014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT131014

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6515 nt

Genomic location

chr9-:36422448..36485775

Exon number

13

Exons

36422448..36422744,36424610..36424682,36440506..36440755,36441660..36442453,36442716..36443470,36445822..36446316,36447748..36448390,36449735..36450211,36453715..36454339,36457538..36458713,36461192..36461242,36461274..36462020,36485637..36485775

Genome context

Sequence
000001 AATTAAGGCC CTTTGTCCAA GATGATTCCT TGTTTAAGTC AGCTGTTTTT TGCTGCCCTC TTGCACCTTA GCTTTCCTGC 000080
000081 TGTGGTGGCT GTTGGCAGGG TGCTTTGGGA AGGACTGCCC CAATTCAGAC AAGATGGGAC TTTTTGCCAA CCTCTTTTCC 000160
000161 CGGTCACTGC ATGTTTGAGT TCCTCAGGGC TTGGGCCTGT TTCTTCATCT CTCTTCTGTG TTTTCTGGAT GATAGCATTT 000240
000241 GTTCCCAAGG ATTTAAATAT CATTTATGTG CTGAGAATCC CCAAATTTGT ATTTTATAGG GAGTTCATAC TTCACATGTC 000320
000321 CAAACTGAAA TTATTATCTG CAAAACTATT TCTCCCCTTA GTTTTTTCCA TCGGAAATGC TTAAACCAGG AATCTAGGAG 000400
000401 TCATTTTTGG CACCTTTGTT TTTCTTACAC ACCACTCCCC ACCACATTCT TGTCCTTTCC AGCACATCTC CAGAATGTAT 000480
000481 TTTGTATTGT TTCACCTCTT TTCACTGAAG CTATCCCATC TCTCCCCCTG AACTGCCACA GTAGCCTTTC AGCTGGTCTT 000560
000561 CACACTTGTC TGGTCTCCAA TTTTTTTCTC TGCATAGCAG CCAGAGAAAG CTTTTGAAAG AATGGGTCAC ATGGTTACTT 000640
000641 AAACTATTCA GTGGCATCCC ATTGCACTTG AATTTACAGT TTTTCCTGTC TCTTCCAGGC TGTTTTCTCT GCATAGAACA 000720
000721 CTCTTGTTCT ACCCTTTGAG TACTCAGCTC CTTCTCATCC CTGAGCTCTC AGCTTTCTTC TGAGGCCTTC CTTGACTACT 000800
000801 CAGTCTAAAG AAGGTTTTAC CTCTCTGCTC TGTCATTGTA TTCTGGTTTT CTTTTTCCTT TATAGCATAC AGCTTACCAC 000880
000881 TACTCTTTTG TTTGTTTGTT TGTTTGTTTT GAGATGGAGT TTTGCTCTTG TTGCCCTACA ACTCTTAAAG ATGGTGTGTC 000960
000961 CAGAGTTTGT TCCTCCAGAT GTTCAGATGT GTCCGGAACT TCCTTCCGGT GGGTTCGTGG TCTCACTGAC TTCAGGAGTG 001040
001041 AAGCCGCAGA TCTTCGCAGT GAGTGTTACA GCTCTTAAAG GTGGCACGTC AGGAGTTGTT TGTTCCTCCC GGTGGGTTTG 001120
001121 TGGTCTCGCT GACTTCAGGA ATGAAGCCGC GGACGCTTGT GGTGTGTGTT ACAGCTCATA AAGGTAGTGC AGACCCAAAG 001200
001201 AGTGAGCAGC AGCAAGATCT ACTGTGAAGA GCAAAAGAAC AAAGCTTTCA CAGCGTGGAA GGGGACCCAG GCGGGTTGCT 001280
001281 GCTGCTGGCT CGGGTGGCCA GCTTTTATTC TCTTATTTGG CCCTGCCCAC ATCCTGCTGG TTGGTCCATC TTACAGAGCA 001360
001361 CTGACTGGTC CATTTTACAG AGTGCTGATT GGTGTGCTTA CAATCCTTTA AACACAGAGC GCTGATTGGT GCATTTACAA 001440
001441 TCCTTTAGCT AGACAGAAAA GTTCTCCAAG TCCCCACCCG ACCCAGAAGT CCAGCTGGCT TCACCTCTCA TTACTACTAT 001520
001521 ATTGAGGCTC TGCATTCCAA AAGCGTTGGT GTATGTGAGG AGAGGCAACC TTTGTTGTGT GTTCTGCAAC CATCAATGGA 001600
001601 CTGCCTTACC TCCACAGCTT GAAAGCTTTG TTTACTTAAA GCAGGATTCT GAACCTTTTT GGCATGATGG TTCTCTTTTG 001680
001681 AGGATCTGAT AAAAGCTAGG GCTCTTCTCA ACCTAACACA TGCACAAATG CACATACATT CTGAATTTTG TGTACAGTTT 001760
001761 TAGGGAGTTT GTAGACCTCC TGAAGTCCCC TGATAATTTT TTTTTTTTTG GAGACGGAGT CTCCCTCTGT CACCCAGGCT 001840
001841 GGAGTGCAGT GACGTGATCT CAGCTCACAG GTGCCCACCA CCATGCCTGG TTAATTTTTG TTTATTTAGT AGAGACGGGG 001920
001921 TTTCACCATG TTAGCCAGGC TGGTCTTGAG CTCCCGACCT CAAGTGATCC ACCTGCCTCA GTCTCCAAAA GTGCTGGGAT 002000
002001 TACAGACGTG AGCCACCATG CCCAGTCCCC TGATAAACTT AAGCCTGTGG ATCTCAGTTT GAGAACCTAT GCCTTAAAGA 002080
002081 TTATCTTCAA CCGTAAAGTT TGTACATAAG GGAGCCTGGC CAACATTGGC AAAACCACGT CTCTACTAAA AATACAAAAC 002160
002161 AAAATTAGCC AGGCATGGTG GCGGATGCCT GTAATCCCAG TTACAACAGA GGCTGAGGCA GGAGAATCAT TTGAACCTGG 002240
002241 CAGGTGGAGG TTGCAGTGAG CCGAGATTGC GCCACTGCAC TTCAGCCTGG GTGACAGAGT GAGACTCTGT CTCAAAAAAA 002320
002321 AAAAAAGTAT GAAAGAATTT TATGTATTTG TGGTATTGTA GGTACATTTT AATATTTGTT ATGGAAAAAT CTTAAACATA 002400
002401 GCTTTAGAGA GACTAGTATA ACAAACCCAT GCGTACCCAT TACTAAGGTT CAATAATTAT TAGAGTGGCA ATTTTATGCA 002480
002481 TCTCCACTTC TACCTTCTCC CCTCATCCCT ACTTTGTGTT ATTTTGAATG ATTCTAAACA ACATATCATT TATCTATAAA 002560
002561 TATTTCAGTA TGAATCTCTA ATCGTGTACA TGACTACTAT GTCATTATCA CACTTAAAAA CTAATTATTC TCTGGCTGTG 002640
002641 TGCAATGACT CACATCAGTT ATTTTGTGTA TAACTGAGGC GGGAGGATTG CTTGAAAGTA GGAGTTCGAG ACCAGCCTGT 002720
002721 GCAACATGGC AAGACCTGGG GGCAACAAAA AAGTTTGGAA ATAGAGTGAT GATGGTTGCA CAACTAAGCT TTATAATTGG 002800
002801 GTTTCGAAGA GTTAGGTTCA TGCCACTGAA TTTATGCTTA AAAATGGTTA AAATGGTGAA GTTTATGTAT ATTCTACCAC 002880
002881 AATAAAAAAT ACAAAAGAAA GGGATAGCCT TATGATAGTA TATGATCGCA TATAAATACA TGAGGGAATT CAATAGTGCA 002960
002961 GTTCCTGTGA ACAGAGCGAA TATGTTTGTC AATACTATGT ATTTTATGGG GAGAAAGACC TAGACCAGCC TTTAAATCAG 003040
003041 TGAGCTTCCA AAATTATATC AAATAGCAGA ACTATGAAAA ATAAAACATG ATATTGGAAC TCCTGAGTGA GAAGTCCACA 003120
003121 AAGCTTCTTC CATCCAGTTG AGCAACTTCC CCTGCTTCTG CTTAATTGTA GGACCTGCAA ATGTTTTTGT GTTTGTTGTT 003200
003201 TACGAGATAA GGTCCTGATG ATAATTGTGA GGTTCGTTTT TCAATATCAA TCTCTGGTAA CCAGAAGATT AAGTCAGCTA 003280
003281 GAACATACAG CTCTGAGAAG TCTGGTTAAG AAGATTCTGC TATATTTGAT CATTTATGTT TACATTTGTG CTTGCCTAAT 003360
003361 ACTTAGATAT AGTTTATCAC AATGAATACA AACATAGTGG CTGCAGGGAT ATGGTTGGTT TGGGGTGGTA GATTGCTGGC 003440
003441 CCAGGCCTTA AGAAGACCAG TTCTGTCCTC ACTCTGCCCT CACCCTGTCA TTAAGTTTCT GTGTGCCTTT GGGTAAGTCA 003520
003521 CCTCCCCTTT TGTGCTTGGT GTAAAATTGT AGATGTGATG AGCTTTAAAG GCTCTTTTCA GCACTGCAGA GCTGCATGTA 003600
003601 GGCTTCAATA TTACAGTGAT GAATTGCCCT CTGTTATACT TCTAGTTCAG AAGAACTTAG GGGGTAGAAG CCGCTGCTCT 003680
003681 TGGTTGCCTA TGAGAGTAGT TAATGCACAC AGTGAAAACA AAACCCAATT ATGAAGTTCA GTTGAATGCA TTTTCATTTA 003760
003761 GTCCTATTAA TACAGTTAGT AATTCTTCCC AGTGTTAAAA TCTCAAGCTT CCTCTTGGTC TGGACCCTAA GGTCATTGAG 003840
003841 TTTGAGAGAA AGCAAACTGT TTATATGAGT GCTTCATATT AACTGGTTTC CTTCAAACTC CAGGAACAGA AACTAACCCT 003920
003921 TTTTGTGATA CAAATCAGTG TAACATTCCC AGAGTTTGTA CTTGAGGGGC CAGAATTCTT AGCAGAGGCT GCTGGCATAG 004000
004001 TTAACGCTTG GGCAGGGCTA AGTCACTGGG AAACTGCCTG ACATGATCAG AGGTTCAGGT GTGCTCATGG ACCACACAGA 004080
004081 ACAGCCTGAG AGTTTGTAGC ACATCACAAA GCTTGGTGGA CTTCCCTGTG TAAGAGCCAA AACTTTGTTT AAGAGGCGGG 004160
004161 AAAGATGGAA GACAAGGACT GGATTCAAGC AGAATGCACG TGGGAGAATA AAACAACTCA GGGACTAAGT GCTACACTGT 004240
004241 GTGGCAACGG CTCTGAAGTT CCACATCAGG GGGAATCGTT TGAGCCTGAT AGTTGAAAGG GAGAAGAATC TGAATACATT 004320
004321 TTTCCCTAGG CTGTCATTTC AGGTGACATG TTTTGTTTTT CCTTTTTAAT GTAAATATAT AGCATTGATA TTTTTCTCAC 004400
004401 TCTTGCAACT TTCAGCCATT GCTTTAATAT CTTCGTGTGA AAATCGGTCT TTGAGGTTTA TGCTATTTTT CCCTATAACC 004480
004481 CCTTTTTGCT GTCTTCTATT AAAGCTCTAG GCACAGACAT TTCTCTCATC CTGCACCCCT CAATTCATCA GAGATTTTAT 004560
004561 TATCTGGCTC ACAGTGTTGC TGTCCCCACT CCAGGTCTTG CCATCACTAT GCCTGCGGAC AATCCATTTA ATATTTCACT 004640
004641 CTCTAGGAGC TTAATCTATG TGGAGATAAC AAACATATTA AAAACAGTAT GATACTTAAA AATAACGTTT TAAGGCATCC 004720
004721 ATAGAAGTGG CATAAGCCTG TGTTTGAAAC AAAGCCGTAA TTGGGGGATG GACACCTCTT TTCTTCTAGG TTCACATTTC 004800
004801 CATGTGGAGG GACATCACTG TGTAATTCCC TTGGCTTCTC TTTGCGCCCA GAGGAGGACT TACTAATCTC ATTGAAGAAT 004880
004881 TTGGGTGAGC AACTAGGCAG GGCTTAGGAG CCAGCCACTT GTAGCCTATT CTTGGAAGCT GCAAATTTTC CAGAAACAGA 004960
004961 TCTCTATGTG GGTAGGCCTA TAGTTTTCCA ACTGCTACTG TTATTGGGTG AGCGAATTGC TCAATTCCAG CAGACACTTA 005040
005041 TTTTTTTGAG ACTGAGCCTC TCTCTGTTGC CAGGCTAGAG TGCAATAGCA CGATCTCGGC TCGCTGAATT AAGCTGACAG 005120
005121 TTTGGTCACT ATCTGACTTT TTTGGTCATA TTTCTCCCTT TTTCCAGAAA TGAGTGGGTA GGTGGATGGA GGGAAGGGAT 005200
005201 TTTATTTAAT GAACCCCCAA GCTCCAATAG TAGTCATTGC TAAAAGTTCA TAGGGGAGAT GATACCATCT AGCTTTTTTG 005280
005281 AGGCTTGAGT TGGATATTGA GGGATGGCAG AATTGAGGTA GAGTTTTAAA GATGGGTCTA ACAGTATGAG AACATTCAGT 005360
005361 CAGATTACGG TGAGTTCAAA GAACAGGAAG TTGACAGCCG GTTTGAGCTA AGGCTTTGGC AAGAGTTGGT AGTGATGAGA 005440
005441 TTAGGAAGAT TGGAATGCCT GATGGACAGA TTTGACTCTC CCCCTCCCCC CCTTATAAGT AGGAGGAAGC TATTGATGGT 005520
005521 TCCTATGTAG GGGAATGACA AGGTTAAACT GATGTATTCA GAAAGAATTA TCATTAGTGT CTAAGAGTAG GCTAATATTC 005600
005601 AGTGATAATA AATAGGTTTA TAATCTGATG TTCACTGTAA ATCAGTTTGG AAGTACAAAT GCCTTAATAT ACTAGAAAAT 005680
005681 AATCTTTCTT AGAAGTTGTC ATTCCTTAAA TAGCTGTGAT TTCTTTGAAC AGAAGGTCAA TTCCCAGGCT AATTTAGATG 005760
005761 GACTTGAGGT GTCATAGAGC AATAGTGTTA ACTTCCCAAA GCAAGCCTTT TTGAAAGAGG TGCACAAGTT GTTGTTTTTA 005840
005841 ATTGAGGAGT ATGTATATGA ACGCATCTTA GACCTTTGGT TTGGTGAAAT CCATCCGAAG ATGCAAACAA TACAAAATAG 005920
005921 ATCAATGTGT CCTCAGTTCC ATTGTCCTTT TCAAGGATAA TTACTGTGAG CAGTTTGTAT GTATTTCTAG TCTCTATGTT 006000
006001 TAGATAACAG GGCCTTATTT ATTTATTCTG CAACTTGCTT TTTTTTTCCA CTTAACAGTA TATTTTGGTA ACTTTTCCAT 006080
006081 GTCAGTAACT TTTTCTTTTC TTTTTTTTCT TTCTTTTTTT TTGAGATGGA GTTTCGCTCT TGTTGAGGTA GTGTTGGTGC 006160
006161 TTCTTTTCAG TGCCAGTCCA TCCATCACGA CCACATTTGT CATGATGACA GTGACAAGAG GAACAGGAGA TCAGCAGGGT 006240
006241 AAAGAACTGT CTGAAACGAC TCTCCTTTCT TCCTGCCTAC CATGTATATA TTGATTGTTT CCTAAATGGA AATGGAGAAA 006320
006321 ATGGATTAGG GTCTCTTGAC TATGTATTTA GAATTTATTC AATTCATTCA GTCAGCAAGT AGTACTTATC GATAGGTAGC 006400
006401 TATGTGTCTA GGCATTTAGG GAATACAGCC AGATAGAAAA CAGATAGATT CTAGTATAGC ATTTTACAAT AAGTGAAGTG 006480
006481 GATAAAAGAA AAGTTACAGA TTACAGCCTT TCTTT
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Predicted Small Protein

Name NONHSAT131014_smProtein_950:1180
Length 77
Molecular weight 7816.9606
Aromaticity 0.0789473684211
Instability index 46.7986842105
Isoelectric point 4.59368896484
Runs 12
Runs residual 0.0164851784634
Runs probability 0.0415562621445
Amino acid sequence MVCPEFVPPDVQMCPELPSGGFVVSLTSGVKPQIFAVSVTALKGGTSGVVCSSRWVCGLA
DFRNEAADACGVCYSS
Secondary structure LLLLLLLLLLLLLLLLLLLLLEEEEEELLLLEEEEEEEEEEELLLEEEEEEELEEEEEEE
EHHHHHHHHLLEEELL
PRMN -
PiMo -