NONHSAT131104

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT131104

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3723 nt

Genomic location

chr9-:37877572..37904350

Exon number

5

Exons

37877572..37880745,37881515..37881628,37899826..37899947,37903528..37903554,37904065..37904350

Genome context

Sequence
000001 ATCAAGGGTG AAGCATGGTG GCTAGCGGAG CCCGCATCCT GACAGGTGTG CTGGCGTGGC CCTCTACCTG CCCCGCCGCG 000080
000081 GCGGCCTGCG GCCAGGAGAA GTAGGCTGGC GACATCTGGC GGGCCGCGGG CCGAGGGAGG GGAGGCGGGG CGGGGCGGTG 000160
000161 TCTCCCTCAC GTGACCCCAA CAGCGCCCAG CGCGTCGCGC TGCGCCCCAA CCTCGGGGTC GGTCACAGTC TGCGCCTGCG 000240
000241 CGGGCCCCGG CTCGCTAGCC GTCCTGCGGG ACGCCGGCGC TGATGGGTTG GGGAAATGGA CGCCTGGAGA ACGGAAATCC 000320
000321 AGTTATCAAA ATTGACTCAA GAAGAGAGAA CCTAACAGAA CAATAACAAT GGAAGAAATT GGGAACATTA TCACAAAGCT 000400
000401 ATCATCCTGC CAAACTCCAG GCTCAGATGT CACAGGGTTT CTATTGCCTG GGCTGGAGTG TAGTGGCATG ATCATGGCTC 000480
000481 ACTATAGCCT TGACTTCCTG GGCTCAAGCG ATCCTTCCGC CTCAGCCTCC TGAGTAGCTG GGACTACAGA GACGGGGTTT 000560
000561 CGCTCTTGTG ACCAGGCTGG AATGCAATGG CGTGATCTCG GCTCACCGCA ACCTCCGACC TCTGGGTTCA AGTGATTCTC 000640
000641 CTGCCTCCGC CTCCCAAGTA GCTGGGATTA CAGGCATGCG CCACCACGCC TGGCTAATTT TGTATTTTTA GTAGAGATGG 000720
000721 GGTTTCTCCA TGTTGGTCAG GCTGGTCTCA AACTCCTAAC CTCAGGTGAT CTGCCCACCT CGGCCTCCCA AAGTGCTGGG 000800
000801 ATTATAGGCG TGAGCCACCG CGCCGGCTGC CTTAAATCTA TTTATCTGAC GTTCCCAACT AGGAAATTTT TTGTCCAAAT 000880
000881 GAGTATATGT GATTTTAAAG TAGAAATCGA AGGTAAAATA GGATTTATCT CAGTTCCTAT CTCCCTTCAA TCTATTCTTC 000960
000961 ATATTGTCAA TAATTTTTTT TTTTTTTTTT GAGACGTGGT CTCTGTCGCC AGGCTGGAGT GCAGTGGTGA AATCTTGGCT 001040
001041 CACTGCACCC TCTGCCTCCT GTGTTCAGGC GACTCTCCTG CCTCAGCCTC CGGAGTAGCT GGGATTGCAG GCATCCGCCA 001120
001121 TCACACCCGG CTAAATTTCG TATTTTTTCA GTAGAGACAG TTTTGCGCCA GGCTGGTCTC AAACTCCTGA CCTTAAGTGA 001200
001201 TCCACCTGCC TCAGCCTCCC AAAGTGCTGG GATTACAGGC GTGAGCCGCC GTGCCCGGCC ATCAGTAATT TTTTAAAATG 001280
001281 TCACTTCAAT AAATGCTTTT CCTCTGCCAT AAAGACCAAA CATCTTGCTG TGGCCTACAG GAGACAGGAT GATCCAGCCC 001360
001361 TTGCCTCCCT TACTCTCATC TCTAGCTAAA ACTGCGCTGC TGTCTCTGCA CTCCAGCCAC TGGCACTTCC TGATTACTTG 001440
001441 GGGCACGCTG TACTCATCTT GCTCCCAGCC TCTGCCCATG CAGGTGCCCT CTGCCCTCAG CACTGCCTTT CTCTACTTCA 001520
001521 TTTATAGACT GCTGTCCTTC AGATCTCGGT TGAAGTGTCA CTTCCTTGGG GAAGCTGGCT TACACTCTCA GGACTCGGTT 001600
001601 AGGTTCCCCC GTCAGGCTCT TCTATGTCAC CATGTTTCTA TTTTTCACAG CACTTAACCT GTTTTAATTA CGTTGCAAAT 001680
001681 AGTTTTTGTT TGGGTCTAGA GAAGCATGTA TTCACTAGTA CATTTTATTT GTGTTCTCTA ATTATTTTTT CTGCAGCTAA 001760
001761 ATTAGAAATT TGTAGTTTTC CCCCTAAAAA TGCAATGATG TTTTCTCTGA TTTTCTTGTC ACCTTTCTTC CAAAAAATCC 001840
001841 ATGTGTTCAA AGTGCTTGCT TGCAGTTTGC CCCATAATAA ATGGTTGTTT AATCCAAATA TCTGAGTAGC AAACTGAGCT 001920
001921 GATCCTTCTG GAGAAAGTAT GGTTGAATAG CCGAGACCAC TGAGTAGTCG CAGAGAAGAC CACACATCCT GAACTCCTCA 002000
002001 GTCTGGTGTG AGGGGAGGAC AATAGATAAC TGGATGTGTA GTGTTCCCAA ACATCACTGA TCCCAAACCA TTGCTTCTGC 002080
002081 CTGCCACTGC CACAAATACA GTACGACTGC CACCCCTTCA TACTCAGCTT TAATCCTCAG CATTTCTTCT GGTCCTTTAT 002160
002161 GTGCGGATGT TACTCAAAGT CTACATGGAA TGCCAAAATT TCCACAGGCC TTGATTTTTT TCACGGTGAT TAAGATCAGA 002240
002241 AGTAGAACCC ATCAATACTA TAACACTGCA CTGACTTTCT GATTTCAAAA GCAACTCTAC TCTCTACAAC CCACGCAAAG 002320
002321 TTTTTCCTTA CCATTTGGAA CCCTTCAGGA GTTACACTGA AGCCTTGATA AGACTGTTTC AGCCAGGAGT GGTGGCTCAC 002400
002401 GCCTGTAATC CCAGCACTTT GGGAGGCTAA GGCAGGAGGA TTGCTTGAGT CTGGGCAACA TGGCAAGACT GGCTCTATTT 002480
002481 TTTTAAAATA ACATTTTTAA AAGTATGATT AAAAGACTGT CTTTCTATTG GCTTTGCTCC CCCGATGGTG AGTGTCTCTA 002560
002561 GGAGTCATTA TCAATAACAT CAGTGAGAAT TTCTTTGCTG GTCACATGAA CACCAAATTC AATCTTCATA TCAACCGGTG 002640
002641 TACAGTTCTG GGAGCAACCG GGATTTCTCC GGGATTTCAA AAACAGCCTA TGTGGCATGA CTCATGATAT CCACTTCAGT 002720
002721 TTTATACCAA GTGCAGCAAA GCCAAATTTT GCTGCAATTA GCTGTTGCCT AGACCACTGT GGGTCATGAT TGGCATCATC 002800
002801 CTTGAAAAAC ATCTCCACTT TAGGTGGGCA AAACTCACAT CCTTCCTTGA CACCAGGATT TCTTTCGAGT GAAGAACCAG 002880
002881 TTGGTATTCT TCTGCAAACC ATTCAGTTGG AATTATTTCA CACTGGGGCA CAATGAAAGC TGTCTCCTCA CATTTTCTGG 002960
002961 TGAAAGCAGT TTTAATACCT GCTTCCTGTA ACAACAGAAA AATGCAACTG GTAATTTTAT TTGAGATTGC AGCTTTTCCT 003040
003041 TCCAGGTGAT TCTGACTGCA TTTCCTGCTG TAATCTGGTC CTTAGATTGC AGGACTTTTC CTGGCCTATC TAACAAGCAA 003120
003121 TTCATAGACC TCTTTTGTTT TACCCTCACA TAGTTTTTTA GCAATGTTCA GTACCTCAGC TCTCACTATT ATCCTGAGTG 003200
003201 GGATGAAAGT TGCACCCATG CTGAGAGGCA GAAATCTCTG TTGTGAATAT TTGATACCTC TTGCTTTATT TATTTATTTA 003280
003281 TTTATTTATT GACACAGATT CTCACTCTGT CACCTAGGCT GGAGTGCATT GGCGCAATCT TGGCCCACTG CAGCCTCAGC 003360
003361 CTCCCAGGCT CAAGCGATCC TCCCATCTCA GCATTGCCAG TAGCTGGGAC CACAGGTGTG TGCCACCATT CCCAGCTAAA 003440
003441 TTTTGTATTT TTTGTAGAGA CAGGGTTTCA CCATGTTGCC TAGGCTGGTC TCAAACTTCT GAGCTCAAGT GATCCACCCA 003520
003521 CCTCAGCCTC CCAAAGTGCT GGGATTACAG GCATGAGCCA CCATGCCTGG CCCTGTTGCC TCTTTAAAAA GCCAGTCCTG 003600
003601 GCAGGGCACA GTGGCTCACG CCTGCAATCT CAGCATTTTG GGTGGCCAAG GCAGGAGGAT CTATTGAGTC CAGGAGTTTG 003680
003681 AGAGTTCAAG TCCAGCCTAG GCAATATAGT AAGACCTTGT CTC
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Predicted Small Protein

Name NONHSAT131104_smProtein_716:991
Length 92
Molecular weight 9971.6416
Aromaticity 0.131868131868
Instability index 43.3747252747
Isoelectric point 9.18463134766
Runs 14
Runs residual 0.0203754578755
Runs probability 0.0323895323896
Amino acid sequence MGFLHVGQAGLKLLTSGDLPTSASQSAGIIGVSHRAGCLKSIYLTFPTRKFFVQMSICDF
KVEIEGKIGFISVPISLQSILHIVNNFFFFF
Secondary structure LLEEEEELLLLEEELLLLLLLLLLLLLLEEEEEELLLLLEEEEEELLLLEEEEEEEEEEE
EEEEEEEEEEEEEELLHHHHHHHHHHHHEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLL
LLLLLLLLLHHHHHHHHHHHHHHHHHHHLLL
PiMo oooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiii
iiiiiiiiiTTTTTTTTTTTTTTTTTTTooo