NONHSAT131158

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT131158

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2667 nt

Genomic location

chr9-:38540564..38545369

Exon number

3

Exons

38540564..38540846,38542309..38544635,38545313..38545369

Genome context

Sequence
000001 TGCTGGGAGG TCAGACCCTG TGAGGGCTGT GGGGGCATCA GGCGCAGTGG GCTCCAGGGA GCCTGGCCTG AGACCTGCCC 000080
000081 AGTGCATTGA GGGTGCACCT GGAGCCCACT CCGCCTGATG CCCCCACAGC CCTCGCAGGG TCTGACCTCC CAGCATGCAC 000160
000161 CTGCCCCTCC CTGCACCCCA GATGTCCACC CTACCTGTTC CCTGACTTCC TCCATCCTGT CCAGCAGGAT GGGCTGGACA 000240
000241 GTGGGACAGC CTGTGTGCAC ATTTTGTGGC AAGTAGGAGT GACACACCAT CCCTGGGAGG CACCATGGTT CCTGCCAAAC 000320
000321 CCAACCCCAG AACTCTGTCC CTGAGGTGGT TTTACCAAAA CCCAAAACCC AGAATTGTGC TTGTGGCTCA GGGGTCAGCA 000400
000401 CCTGCTAGTA CCAGGACACT ACTGGGAGGC TGGGACCTGA CCGAAGCCCA TGGTGTCTGT GGCCTGAGGA CAGGGTGTGT 000480
000481 TGGGGCCATA AGTCCCGGCC ACCAATGGCC ATTGGGTCCT AGGGCCTCAG CCCCAGTGTT TGCCCTTCCC TGGCTCCTTC 000560
000561 TGGTTCAGTC CCATTAGGGC CCTGGAGCCC AAGACCCAGC ACCCAAGGTC CCCTCCAGGA ATACTGGCGG CTTGGCTTCC 000640
000641 TTTATCATGT TTCATCTGAG AGCAAAAATG TCAGATCGGA TGCACAGAAA AATGGCCCAA ATTGTTTAAT AACTAGAAGA 000720
000721 AATATAGGAG CAGCAAGAGG GTAATATGGA GAGGGGAGGG CCTCCATGAC CGGTGTCTGC AGAGCCAGGG GTACAGGCAC 000800
000801 CCAGTGTTGT GGCCTGGCAC CACCGGCCTC TCAGAGCGTG GGTGGCCCAC TGTCTTTACC CGGAGGACAG CAGGCCTGAT 000880
000881 CACCAGCTTT TCTACCTGTC CCTGTAAGCA TCACGTTGCT AGAAGAAAAT CTCATGCCAG AGCTTGCACC ATCCCTAGCT 000960
000961 TGGGGGTTAG GGGTTGTCTC TTGGTGACCT AAATGAAAAA ATAGGTCCAG ATCAGAGTTC CTGACGCAGA GCACTCACCC 001040
001041 ACTCTTTGAA TCGTGGGAGG GGAGGCCTGG TTTTAGTTAA ACCTAACCTC TTTGAGGAAC CACAGAGCCC AAGACTGGAA 001120
001121 GCCTTCAGAA TCTTCTGGCC CCCAACCCTC CCTGGGGACC CCTGTGGCCT GTCTCACCAG AGCACTCTTC TGTCTGTAGA 001200
001201 TGTCTCAGCT GCTCTACAAG GGAGTCCCAT TTCAGGTGTG GGGCTGGGCA TGGTCACTCC TGCTGGATGT CTAGAAGGTG 001280
001281 GAAACTAAGG ACCTAGGAAA ATGCCAGATA CAGCCTTTCC ACCCTCATCC AGAGCAGGAC AAACAGGCCC GGTGGTGTCA 001360
001361 GGAGCCCAGG TCTCCAGCTG GAGGGAACGT CAACCCTGCA GTGGGAGCAG GGGCCCATCG CACATCCTAG GCACAGATGC 001440
001441 TAATGCAGGC ACTGCAGGTA AGCTGGGCTT GGTATCCTTC CCTGGCTTCA GAAAGAAGCC AACAAGGAGC GTTTTGCAGA 001520
001521 ATGAAACCTT TGTTTCCAGA AGCACTGCTG ACTGTAAGTG GTTGCCGTTT GTGGCAGTGA GCATTTTGTC CATTCTGAGG 001600
001601 TTGGATTGGT TTCTCCTTTT GGCCTTGCCC TGCCCTACAG ACCATAAAGG AGAACAGCAA GAAGCCCCCA GCAAACATCC 001680
001681 ACATATGGCC CTGGACATCA GCCACATTCT GAGGAACATG TCATGTTCTG GGAGGGCTAA GGCATCAAGT AAGGCCTGTG 001760
001761 GGGCTGGAGG ATCCAAGGCA AGGTGGGGCA ATCCAGAGCC ATGGGGGCTT CCCATGGGAA TTGGGAGGTC CCAAGGCAGA 001840
001841 GTCAGAGGTT CCACAGGAGG AGTCAGAGAG TCACCAAGGG CTCTCCTGGC CCAGGGAGCA GTCAACACCA TGGACTGAAC 001920
001921 ACTTGCTGGG CTCCAACCCT TGGGCCAGGC TGCCCATGTG GGGCCAGGAG GCAGCTCAGA GTGGGAGGCA GAGAGAGAAG 002000
002001 TGTGCTCAGA GGGCACCTGT ATCTGGATGT AATGTGGTCC TGAGACTCTG GCTGGGAAGT GCTTCCAGGG TATCATATGT 002080
002081 GTTATGCAGC TACTTCCTCT CCCCAGCCTT ACCCTGTAGG AATTCTAGTG ACTATGTTGC CACCATCTTG GAGCTCCATG 002160
002161 CCCTCATAGT GTAATGGCAC CAGCAGATCT GCCTGTGCAC AGACTTCCTG TACTACCTCA CTCCTGAGGG GAGATGCTTC 002240
002241 TGCGGGCCTG CGACCTGGTG CTCAACTTTA GACACCATCA TCCTGGAGCG GCACTGCACC CTCACTAGCC AGGGTGTTGA 002320
002321 CGTCCTCAAG GCCAAGGCCA CATTCAAGAC TTTGGACTTC ATTGATGCAC TTGTGCCGAG CAAGatcctg gttggagtaa 002400
002401 aacattccat gggaactcgg gctgtgagaa atgtcctaac cacctgactg cagaaacatc cttatcacat cctgctgggc 002480
002481 aaaggcccaa cagcctgact tcaggaacat ccttatcatc ttctactgag cagcaagcta tactgtccag agccctccct 002560
002561 cccagcgcta tgattacccc agcctgtgag cggcagtggg cactgacact aagctggttt ccccctccgc agggttttgc 002640
002641 tagtaataaa cctgtgttgc tgttgaa
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Predicted Small Protein

Name NONHSAT131158_smProtein_1955:2173
Length 73
Molecular weight 7928.0975
Aromaticity 0.0833333333333
Instability index 51.8666666667
Isoelectric point 8.88079833984
Runs 11
Runs residual 0.0118613138686
Runs probability 0.0603892662716
Amino acid sequence MWGQEAAQSGRQREKCAQRAPVSGCNVVLRLWLGSASRVSYVLCSYFLSPALPCRNSSDY
VATILELHALIV
Secondary structure LLHHHHHHLLLHHHHHHLLLLLLLLLEEEEEEELLLLEEEEEEEEEELLLLLLLLLLHHH
HHHHHHHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL
LLLLLLLLLLLL
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