NONHSAT131173
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131173 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1713 nt |
Genomic location |
chr9-:38566257..38568006 |
Exon number |
1 |
Exons |
38566257..38568006 |
Genome context |
|
Sequence |
000001 ACCCTGAGCC CACCCCCAAG GTGGCCCTCA ACCTTTAAGA GTGGGAGAGC AAAATTGACG GCTTCGAGCG CTTCACCAAG 000080
000081 AAGATGGACC ACAGGGCACT CAGCTCAACT TCTCAGCCAA TGAGTTGACA TGCAAGCAGA TTATGGTGAC GGGCTTTAAG 000160 000161 AAAGAGCATC AGAAGGTGGC CAGCTCTTCA GCCTCAGCCA GGTCTTGGAG CTGGACCAGG CCATCACTTC ACCAGAGATG 000240 000241 CCTTCAACAC CGTCGGTGAG CTCTTTGCCA ATCAGCCCAG CCAGGAACTG GACCCAGTCA TGGACCTGTT AGTGCTGTCT 000320 000321 CTGGGACACC AGGTCATCAT CCTGGACATC ATCCACATAC ACAAGGAAGC TCTTACCAAA GTCATGGAGA GCAGGCAACA 000400 000401 TGTGGCAGAA GGGAAGACAG AGATGCAGAG GCTGATGACA TCAGAATCAC AGGAACAGGA TTTCTTTGGA CACTGTGGCT 000480 000481 GAAATTCACC ACTTCCATCC AATTCCAGTG AGAAACATGG ACTCACAGAT GCAGCATTTC TTGCAACAAG AGATACTATT 000560 000561 TTTTCAAAAG GTCACCCAGG AATTGATAGT GTTGAATGAC TAGATACTCG ATTGTGCACT GTTTCCAGTT CAAGGATGCT 000640 000641 TTCTACAGCA GAATAATAAC ACTAGCAAAG AGATAGTGCC AGGTATTGGC GGTAGTACAA GGATGGCTTT GTTCTCAATT 000720 000721 GAAACTCGGC TGAACATAGA ATTGTGTAGG AAACAGTTAA TATGGCGATA GAATAGAAAC AGTAGCAAAC ATGACCTAAA 000800 000801 CCATGCTATG AATTCCTACA CTACCATTGT AACTTTTGGA AGAATGATAC CACTTACTTT ATTGCTTTTT GAAGTATGAA 000880 000881 TATTTTCGTG TATATGCTGT AGACCTCAAA CCCTGTGAAG AGTCTCAAAG AAGCTGGCTG GATAAAGCCT GCTGTGGATG 000960 000961 TCTTTATATT CAAAGATTGA TGATGCAATT TGAATATGTG TCCTCACCAA ATCTCATGTT GAATTATATT TCCTAACGTT 001040 001041 GAAGGTGGAT CCTGGTCTAA GGTGATTGAA TCCTGAAGGC AAATTTCTCA TGAATGGTTC AGCACCATCC CCTTGCTACT 001120 001121 GTCCTCACAA TCATGAGTGA CTTCTCATGA CACCTGGTCA TTGAAAACTC TATGTCACCT CCCTACTCTG CATGTTTTCC 001200 001201 TCTTGCCGTG TGAGACAACT GACTCTTTCT TTGCCTTGCA CAAAGATTGA AAGATTTCTG AGGCCTCCCA GAAGCAGAAG 001280 001281 CCCTGTGCTT CCTGTCCACC CTGCAGAACC GTGAGCCAAT TAAACCTCTT TTTCATAATG AATCATACAG AAAATGGCAA 001360 001361 ATGAGGACTG GAGCATTGCT ATAAAGATAC CTGAAAATGT GGAAGCAGCT TTGGAACTAG GTAATGGACA GAGGTTGGAA 001440 001441 GAGTTTGGAG GGCTCAAAAG AAGACAGATG AGAAGGTTTG GACCATCTTA GAGACTGGTT AAATGGTTGT GACCAAAATC 001520 001521 CTGACAGAAA CATGGACAGT GAAGGCCAGG CTGAGGAGGT CTCAGATAGA AATAAGAAGC TTTCTGGAAA ATGTCTTCCT 001600 001601 TTTGGATATG GAAAGCTTAC ACAATGCCTG TACCACCACT GTACCTTAGA AGCAGTGATC TTGCATTTTA TTTCAGAGGC 001680 001681 TTATAGGCAA AAGAGGCTGC AGCCTTGACT CAG |
Predicted Small Protein
Name | NONHSAT131173_smProtein_299:481 |
Length | 61 |
Molecular weight | 6859.8639 |
Aromaticity | 0.0333333333333 |
Instability index | 53.4466666667 |
Isoelectric point | 5.59368896484 |
Runs | 10 |
Runs residual | 0.0169326241135 |
Runs probability | 0.0407260201378 |
Amino acid sequence | MDLLVLSLGHQVIILDIIHIHKEALTKVMESRQHVAEGKTEMQRLMTSESQEQDFFGHCG |
Secondary structure | LLEEEELLLLLEEEEHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHLLLHHHHHHHLLLL |
PRMN | - |
PiMo | - |