NONHSAT131365

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT131365

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

1809 nt

Genomic location

chr9-:43830636..43835037

Exon number

2

Exons

43830636..43831108,43833702..43835037

Genome context

Sequence
000001 ATGCATATAC AATTTGGGTT GTGGTTGCTG CGTATCTGTT TCAAATGGGT TATGGGCTCT TCTCACACTT TCAGGTCAAA 000080
000081 GGGGACTTTG GAATCCATAG TGTATCTATG TATGCATATA TGATCATGGA TCAGCCTTCC CATTTCTGTC ACTGTGTCCC 000160
000161 TATATGGTTC ATTATCATGT ATGTTACTTC ACTCGAAGGC CATACACAAT CCAAACAAAA CAAAACACAG AAACTGTGTT 000240
000241 GGCTATTTTG ACTTTCTGTT GAAACTATTC TCTTTGGTCa tatatatatt taaaaaatat tttatatata tatatatttt 000320
000321 ttttttcaag tgattatcct gcctcagcct cccaagtagc tgggattaca ggcacctgcc atcatgcccg gctaaatttt 000400
000401 ttttgtgtgt gtatttttgt agatacaggg tttcaccatt ttaaccaggc tcgtcttcaa ctcctgatct caggtgatcc 000480
000481 gccggcctca gcctcccaga ttgctgggat tacaggcgtg ggccaccacC TAAGATATAT ATATATATAT GTAATCTTTT 000560
000561 TCAGTATATT CTCAGGGTGT GTTTGAGGAA ACCttttttt tttttttttt ttttttttGG CCATTGTCCA AGGGTTTAGA 000640
000641 ACTGAATGGG AATGTCTGTA AATGGATCTG ATGGAGGTTG GAATGtgtat cagcttttaa tcatcactgt aacaaattac 000720
000721 taaaacattc tctttattat ctctcacttt agaagtgtgg gagggctgga ctgatgactc tgcttatagt cttacaagga 000800
000801 caaaatcaag gtgctcttgg gctccttatg aaggccctag ggcagaatgt gtgtccaagc acatacaggt tagagcagaa 000880
000881 ttcaacttct tgtagttgta ggagtgaggt cccaattcat cactggctgg tagttggggc ctctcagcaa tgtcaggctg 000960
000961 cctgcgttgc tcttcatagt gcccagttta ttttctaaac cagcaatggt gcagagagac attctcctgc ttctagtttc 001040
001041 tctggcttcc cctcacccac acctctcttc tgtgtctctt ctgcctccaa ccagagttaa atctcttaag tgctcatgtg 001120
001121 attacatgga gcccactgca tgaatcacga tcatctccta aggtctgcaa ccttaattac atctgcaaaa tcccttatgt 001200
001201 gatgtaacat attcagtttc cagggcatct tggagagtca ttctCATTCT TGCTGCCACA AAATATTCCT CATTCCTTCA 001280
001281 TGAAATGTTG TTTGCTTTCA TATATTTGTC TCTAGAGAAG CATCAGGTAT TTTCtcTTAG AGATTTTCTA TTGCTTATTT 001360
001361 CATTAGTTTC TTTCTGGACC TATTCAATCT GGGCTAGCAA TTCTGAAAAC AAAGTAGTGT GGATCAAACT CTGTCATCTG 001440
001441 TTTCTGTCAC ACAGATTACA GCCCTCATCC TGAAGGAGGG ACAGATTTCA GTCCCATCCT AATAAAAAAA AAATCTCTGT 001520
001521 TCCGTTTACT GTTTTCTTCT ACTTGGTTTG GAAAAATTTT GTTAGAGGCA ATTGTCGATA CCACATATGG CTGAGAGCAG 001600
001601 GTATAGGAGG TATCCTGGTA CTCATACTTG GAAACCCTTA ATTTGGCATC ATCCTCAGCA CATGAAATTT CTCAGATCAC 001680
001681 TAACAATCTT GGACCGATGA TGATTCCTTA AGCCAACTTC GCTCTTCTGA AAAGGCTGGC GGGCATGGCT GCATTTTTCT 001760
001761 GAGGACTCCT ATGTTATCAT CCACTCAAGA TACACCAAGG CATTAACTA
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Predicted Small Protein

Name NONHSAT131365_smProtein_773:997
Length 75
Molecular weight 8001.2325
Aromaticity 0.0540540540541
Instability index 43.7635135135
Isoelectric point 7.67474365234
Runs 13
Runs residual 0.0330257086355
Runs probability 0.045676898618
Amino acid sequence MTLLIVLQGQNQGALGLLMKALGQNVCPSTYRLEQNSTSCSCRSEVPIHHWLVVGASQQC
QAACVALHSAQFIF
Secondary structure LEEEEEELLLLHHHHHHHHHHHHLLLLLLLEEEELLLLEEELLLLLLEEEEEEELLHHHH
HHHHHHHHHHHLLL
PRMN -
PiMo -