NONHSAT131489
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT131489 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1407 nt |
Genomic location |
chr9+:47165617..47167023 |
Exon number |
1 |
Exons |
47165617..47167023 |
Genome context |
|
Sequence |
000001 GTTTCCACTC ACACGGTAGG CGGCTGTGCA ATTTCGTCTG GAGTCCCCAG ACCCCTCCTC ATCCTTCCCA GGGTTGCTCT 000080
000081 GAGGCCATTC CTCGTCATCT AGGAGGGGTC TACATAAAAG CATTTATAAA CACCTCCAAA TGGGAGCCAG GCATGCCCAC 000160 000161 CTTTGGAGCA CTTTTCTCTA CTGCAAATTT ATCTACAGCT CGTGAAATCT CTGGATTTAA CTCTGATGAC AGACTGGAGG 000240 000241 CTGAAGGAGA ACTTCAATAT CATATATTTT AAAGGTTGAT TCACAGTTTG GAACAAGAAT TAAAGAACCA CGAACTTCAA 000320 000321 GGTAAAACGG GCAACGGCGT TGGGGCAAGC CTCTCTGCAT CTGCGTGTCC AGCCTCTCCT GCGTGCCAGA AGTCCCCAGG 000400 000401 CAGGAGTGTG GTGGGACATC CGGCTGGGGT AAGGACAGGC ACCCTCCCAC TGTGTCAGGG CCCAGAGAGT GGGTGGAGAA 000480 000481 GCTCTGCAAG AGACCTGTGC AAGGGCGCCT TGCAGGAGCC TGCAGTCCCC ACAGGTGTGT TTGTGGATAA CACTTGGGGA 000560 000561 GCCCTGGCCT TTTGGGGTCA CGGAGGGCTT GGCCTCTCAC CTCAGAGCTG CGGAGGAGCC GCTTCTACAT CAGGACATCA 000640 000641 GAAGCTGGAA CAGGATGGCC GGCAAGGGGC CTCTTGTTGG GGTCACAGAG ATGGGTCGCA GAGATGGCCC GTGTGGAAGG 000720 000721 TTGGATTCTC ACCCcacctc tgcccctaga tgtcctggtg acccttccct ctgtagtctt ggttttttgc aaaacagtta 000800 000801 tgacctcctg ccatactggg tactttgctt atgtattgtg tttactcttt actgtgtgtc tctcctgcta aggtctacga 000880 000881 agaagggtct ttgtgggtgg ggttcttaga ggcatcccaa gtagcagaag cagtccctgg actaaggggc tcaataaata 000960 000961 ttttttAttt attatttttt ctttttgaga tggagtctcg ctctcttgac caggctggag tacagtggca caatcttggc 001040 001041 tcactgcagc cttcgcctcc tgggttcaag tgatttccgg ctaatttttg tatttttagt agtgacgggg tatcaccatg 001120 001121 ttggccaggc tggtcacaaa ctcctgacct caagtgatcc acccgcctca gcctcccaac atgctgggat tatagacatg 001200 001201 agccaccatg cctggccAAA TATTTGTCAA ATTGAATTTG TATTTCCATA CAAATTTTAG TCTGGATAAA gtgcttcatg 001280 001281 cctgtaatcc aagcactttg agaggctgag gcgggtggat ggcttgagcc caggagtttg agaccagcat ggaaaacata 001360 001361 gagaaacccc gtctcaatat aagaagaaga agaaaaagaa aaaaaaA |
Predicted Small Protein
Name | NONHSAT131489_smProtein_830:1072 |
Length | 81 |
Molecular weight | 8920.1833 |
Aromaticity | 0.15 |
Instability index | 65.798875 |
Isoelectric point | 4.79669189453 |
Runs | 14 |
Runs residual | 0.0361842105263 |
Runs probability | 0.0302319125848 |
Amino acid sequence | MYCVYSLLCVSPAKVYEEGSLWVGFLEASQVAEAVPGLRGSINIFYLLFFLFEMESRSLD QAGVQWHNLGSLQPSPPGFK |
Secondary structure | LEEEEEEEEELLLEEEELLLEEEEHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHLLHH HHLLEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |