NONHSAT131491
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131491 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1457 nt |
Genomic location |
chr9+:47249606..47264801 |
Exon number |
7 |
Exons |
47249606..47249660,47253654..47253741,47253859..47254029,47255383..47255542,47256040..47256195,47263622..47263769,47264123..47264801 |
Genome context |
|
Sequence |
000001 TTTACTATAT ATTTCTGGTA TAAATTTATA TTTCTCCCAA ATCTCATGCT TTTGGCTTTG GAAACCCAAC TCACCATTAA 000080
000081 ATTGCAGCGT CTTAAATTGT ACTCTCTTTG CATACTGATT TATCCTCTGG TACTCAGCTA ATTCTTTTCG TGTTCGTTTT 000160 000161 TGCCATCGAG GACATCAACA GGGGCCCGCT GCTCTTACTC TACATGTCTT TGGGGTATCA CGTCTACAAT ACCTACCACA 000240 000241 TTAATCAGAG GACTTTGGAG GGCCCTCTGT TTTGGCTGTC AGGAGGGGCC GAGAACCTTC CCAATTATAC ATGTCCATTT 000320 000321 GATCCTTTGC CTAATGATGA AGGACAGTTT CCATCTCTGT ATCAGATGGT CCCAAGGAAT CATCTTTGCC TCTTGGCATG 000400 000401 GTGAAGCTGT TGCAGCATTT TAGCTAGATC TGGTAGGGCT GCTTGTCTCG GATGACATAA AAGGTGGGCA TTTTTGGAAT 000480 000481 ACTTTGAAAA CGTGGAAAGC GTGTGTTACC ACCTCCCAGT GGGACTTTAT CACACATGGG GGAAGTTTCA TACTTAATCC 000560 000561 ATTCCATGGG ACTCTCACTT TTTCAAAGCA GAACAGTGAG ATGCCTGGCT TCCAGCATTT TGTTCAGACA GACTCCAATG 000640 000641 AATGTGCAAA ATGCCCAGAC AACCAGTATT CAGTGAGAGC GATCACTGCC TCACAGAGTT GTGACCTTCC TGGACTTTGA 000720 000721 AGATGCACTG GGGACAGCAC TGGCCAGCAT AGCTCTCTGT TTCTCTGTCC TCACTGCCGC CATGGTTCTT ATGATCTTTG 000800 000801 TGAAGCACAT ACACACACTC ATAGTCAAGA CTCTCAGCGA CATCTCTCTG TCTGTTTTCT TCTGCTCCTT GCTCTTCACT 000880 000881 GGCTGTACAA ACACAGTCAC TTGTAACCTC TGACAGACAA CATTTGGAAT CATTTTTACT GTGGTTGTTT CAACTGCGTT 000960 000961 AGCTAAAACT ATCACTGTGC TTATAGCCTG TAAGGCTACA GCATCAGAGA GAAAGCCAAA GTGGTTTTGG GGACCGGGAG 001040 001041 TATTTAGCAC AGTTATTTTC ATCTGTTTCC TTATCCAAGT AACTCTCTGG AATTTGGCAT GGGATCAAAG AGTGCCATCA 001120 001121 GGACTCTCAA TGATGAGGTA TTCTTTGCCT TCCACTCTGT TCTGGGATTC TTGACCTTTT TGGCACTGGG GAGCTTCATC 001200 001201 TTGGCTTTCC TGGCCAGGAG CCTGCCTGAC ACCTTCAATG AAGCCAAGTT CTTGATGTTC AGCATGCTGA TGTTATGTAC 001280 001281 TGTTTGAATT ACCTTCCATA CTGTGTAACA TAGCACCAAA GGGAAGGTCA TGGTTGCCTT GGAAATATTC TCCACCTTGA 001360 001361 CTTCCAGTGC TGAGTGCTAG GTGGTATCTT TGCTCCCAGA GGCCGTATTA TTCTAATAAA ACCAGATAAG AATACTCTTG 001440 001441 GAGAGTTAAG GAAAAAA |
Predicted Small Protein
Name | NONHSAT131491_smProtein_203:403 |
Length | 67 |
Molecular weight | 7641.5675 |
Aromaticity | 0.151515151515 |
Instability index | 48.0121212121 |
Isoelectric point | 5.27899169922 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0261437908497 |
Amino acid sequence | MSLGYHVYNTYHINQRTLEGPLFWLSGGAENLPNYTCPFDPLPNDEGQFPSLYQMVPRNH LCLLAW |
Secondary structure | LLLLEEEELLEEELLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLLLLL EEEEEL |
PRMN | - |
PiMo | - |