NONHSAT131496
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT131496 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1792 nt |
Genomic location |
chr9-:65487273..65494386 |
Exon number |
3 |
Exons |
65487273..65488372,65493627..65493749,65493818..65494386 |
Genome context |
|
Sequence |
000001 gctgccattg cggattttgc cagcttcagc cagtttagtc ctaagaagga acttctgacc ccagacatcc tgttttctaa 000080
000081 aactaagcag ttaaagctga atgggaattt agctctgtca cataggcatt tgttgggcaa caaAAGCAGG GTAGGGCTCC 000160 000161 AGCTAAGCCA CGTAGGCACT ACGATGGGCA ACAGAAAGGT TGGTTTCTGG GCAATTCAGA GAAACCAAGG ACAGCTACCC 000240 000241 CCAGAACTCA GAGTAGCCAA CTGGGCTGCT CACAGGAGAT GCCTTAACTG AAAGGTGATC AGACTCCACA GGAGACCCAG 000320 000321 AGAAGATGTG GAGGGAGCTC AGAGGCTGTC CTGGAGGAGA CGTGGAGACA GCTCAGAGGC TGTCCCAGAG AAGACGTGGA 000400 000401 AAGAGCTCAG AGGCTGTCCC AGAGAAGACG TGGAGAGCTC AGAGGATGTC CCAGAGAAGA CGTGGAGAGA GTTCAGAGGC 000480 000481 TGTCCCGGAG AAGACGTGGA AAGAGCTCAG AAACTCAGAG ACTGTCCCGG AGAAGACATG GAAACAGCTC AGAGGCTGTC 000560 000561 TGCAAGAAGA TGTGGAGAGA GTTCAGAGGC TGTCGTTACT GCTGCACTTG GCTGTTTTTC TTTGGATAAT TATTGCAATC 000640 000641 AATTTTAGTA ATTCAGGTGT TAAATCACAG TCAAGCACCT ATTTACCTAG TGGTAAAATC CTTAAGTAAG TCATATTTGG 000720 000721 TTGGGAAGAT CAAAGAAATC ACCCAGTCTC CCACATCCGA AATTGTGCAG TCTGGACTGT CAGGAACAAA AGTGAAAGAG 000800 000801 AGACGTCATC AAggccgggc gcggtggctc atgcctgtaa tcccagcact ttggaaggcc aaggagggcg gatcatgagg 000880 000881 tcaggagttc aagaccagcc tggccaatat ggtgaaaccc tgtctgtctc tactaaaaat aaaaaaatta gccaggcgtg 000960 000961 gtggcaggca cctgtaatcc cagctacttg ggaggctgag gcagaagaat cacttgaacc tgagaggcag aggttgcaat 001040 001041 aagccaagat tgtgccattg cactccagcc tgggagacaa agcgagactc catctcaaaa aaaaaaaaaa aaaaaagaat 001120 001121 gactaaaatt aagaagattg atgattccaa atattggtaa agatgtagaa caactagaac tcccacatat tgctgatgaa 001200 001201 aatgaagaat aatacattac tttggaaaat actttggtac tgatttacca tatgacccca aaatctcact tgtagaaatt 001280 001281 tatacaggaa aaatgaaaac atatgctcac agaaagcttg tatacacatg cttatggcaa taaatttatt tatagttgcc 001360 001361 tatcaacaag tgatgaacaa atatatttta gtatcttgat actactttct agctagaaaa ggaatactac taagcaaaaa 001440 001441 tagaggatga agtagtaata tacataacat atatgaattt aaaaacacca tgctgattga aagaaaacaa ttatcaaata 001520 001521 cacagtgtaa tattctattc acagaaagtt tgaaaacaaa aaactatagt ctctgaaaga aaaccattgg ttgcaggaag 001600 001601 gtggggattc attggccaca aaagggactg aggaaacttt ttatgggtaa tggaaatatt ttatatcttg atggtggcac 001680 001681 caattataca actgtatgta cacatttgtc aaaattctaa tcgtattata cacaacatga gtgactttaa ctgtctataa 001760 001761 attatatctc aataaaattg gtcttaaaaG AT |
Predicted Small Protein
Name | NONHSAT131496_smProtein_1649:1759 |
Length | 37 |
Molecular weight | 4298.1033 |
Aromaticity | 0.111111111111 |
Instability index | 69.6058333333 |
Isoelectric point | 5.94842529297 |
Runs | 6 |
Runs residual | 0.0137917637918 |
Runs probability | 0.0432491314844 |
Amino acid sequence | MEIFYILMVAPIIQLYVHICQNSNRIIHNMSDFNCL |
Secondary structure | LEEEEHHHHHHHHHHHHHHHHLLHHHHHHLLLLLLL |
PRMN | LHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL |
PiMo | i??????????????????????????????????? |