NONHSAT131665
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131665 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2170 nt |
Genomic location |
chr9-:69233652..69245156 |
Exon number |
4 |
Exons |
69233652..69235606,69238230..69238316,69240013..69240059,69245076..69245156 |
Genome context |
|
Sequence |
000001 accactaaag gcagaagaga atgaaatcat cccacccact gacccgttcc caatctgagc atatggatag ggcccaaagc 000080
000081 aCATTTAACA GAAGAGAAAC CTGATGGCCT TATCAATGAA GCTACTAGGC AAGTTGCTTT GGCAGATATC ATTCTCATTA 000160 000161 ATAAAACAGA CTTGGTCCCA GAAGAAGATG TAAAGAAATT AAGAACGACA CTTAGATCCA TAAATGGACT AGGACAAATC 000240 000241 TTAGAAACAC AAAGATCAAG GTACTTTAAA AAAGCTATTC CTATTAATAA CAAATCATTT TAGTTATTAA TAATAAACAT 000320 000321 TAAGTAATTG ACAAATATGC TTGATTCTGA TATAAGAAAG ATCTAAGTGC ATTTAAAAAG AATTGGATCC AAAATGTTGT 000400 000401 TTGGAATGCT CTTAATAAGT TAGTTTGGCA TATTTGGCTA GTACATTTGC CTGTCTTCAA AACTAAGATT ACAAAGCCAT 000480 000481 GATAACACTG TGTAAGTGTT TGCTTAATGA GGAAGAAAAG ACTTCCAAAC ACTCGAGAGG GTAACTCAGT ACAGAAATCT 000560 000561 GAAGTATATT GAGGAATCTT AATTTGAAGT GTTTAAATGG CTTTTTAATA TTTAAAAAGC CTTCTTAGTG TTTTATAGTT 000640 000641 GCCAAAAAAT ACATGGAGTC TTTACCTTGA AGTTCCTGAC AAATTCTTTT ATTAAATTTT GACTTTCATT TTCTCTAGGT 000720 000721 TCTGTTCCTA AAACATCTGT GAAGTGTATT TCTGTAGATT AAATTCTGTT TTCCATTGAA TGTTATCTTA ATTTCAGAAA 000800 000801 ATTTCTGTGC AGGGTTATTT TATTAAGCTC Attttttttt tttttttttt tttttttttG GTGAGAAAGG CTCAGCAGCT 000880 000881 GATAGACTCA GCAACAGGCA GCCAGGAGCT CTGAGGCTCA CAGCTGGCAG TCTAGTTCCA CTCAGTCTCT ACTTGAGAAA 000960 000961 TTCTTTCTTT GGAAGTACAG CAGAGGCCTT AGGTGAGTGG CTTGTCTGCT ATGGCAGAGA TTAGAGGTGC TGACAGACTG 001040 001041 CCATAAGTAT TAGGCAGTAA CAGCAGCAGC TGCTTATATG CATGTGAACA GCTGGGGAAT TAATTTGGTA TGCATTCTCA 001120 001121 GGAGCCACTC ATCTGCTGGC AGAGGTAGCA GAAGAATGCC CTTAGTGTAA GTCCTCTACA ACCATACACC AAATGTGCTC 001200 001201 CCTGCGTTTC AAATTCCATT GTAGAGAGTC TCTGATAATC TCACTTATAC CATGAGCCAT TCCTCAGTAT CTGTCCTCTT 001280 001281 CCTGTTAGTG TTCTACAATT CCTTTCTCCT TAATTTTTCT CCGCTTTACA AAATGTCACA CAGACAAGTG CATGATACTT 001360 001361 AAACAAGCTT TTAAAAATAA TGCTCATAAA TAGCTTTGGT TCTGTCATAA TATTCGTATT TATAAACATT TTAAGTCAAT 001440 001441 TCTCTTCTTT TATTTTCATT TCAGAAATAT CCATGTCCTG AATAAAAGTT GTGTCTTGAT TAGTTTATTA TGTAACAATT 001520 001521 TAGTGTGTTT GACATTTCTA ACTTTTATTT CTAACATTTG CTTTATTATA GAACAATAAA CATGCAGTGA TTGATTTTTC 001600 001601 TTACTTCAAG TGGATGAGTG AGCAAGTGAC TAAAATCTTC TGTGAATTCT TCAGTGTATG GTGCTTGCCA ATGCATCTGA 001680 001681 GAATCTAGGG ACTTTCTGAA ATAGTACTTC CTTGCTATGA GGACTGAAGT TGGATTAGAA TCCTTTTCAA TGAAGATCAG 001760 001761 ATGTCCTGAG TAGAATTCTT ACTATTGGGT CCTGAATCTT ATATTAAATA TTCTCTCAAA TTCCTTGAGG CATAGCAACT 001840 001841 TGAGCTTACC AGTTTAGAAA CTGGAGATTT Gggctgggcg cggtggctca cgcctgtaat cccagcactt tgggaggcca 001920 001921 aggtgggcgg atcacgaggt caggagatgg agaccatcct ggctaacact gtgaaacccc atctctacta aaaatacaaa 002000 002001 aaattagctg agcctggtgg tgggcgcctg tagtcccagc tactcaggag actgaggcag gagaatggcg tgaacccggg 002080 002081 aggcggagct tgcagtgagc tgagatcgca ccactgcact ccagcctggg tgacagagcg agactctgtc tcaaaaaaaa 002160 002161 aacaaacaaa |
Predicted Small Protein
Name | NONHSAT131665_smProtein_1379:1480 |
Length | 34 |
Molecular weight | 3732.4062 |
Aromaticity | 0.181818181818 |
Instability index | 63.2242424242 |
Isoelectric point | 3.99884033203 |
Runs | 8 |
Runs residual | 0.0583003952569 |
Runs probability | 0.0666732909379 |
Amino acid sequence | MLINSFGSVIIFVFINILSQFSSFIFISEISMS |
Secondary structure | LEELLLLEEEEEEEHHHHHHHLLEEEEEEEEEL |
PRMN | LLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | i???????????????????????????????? |