NONHSAT131877
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT131877 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
915 nt |
Genomic location |
chr9+:75482102..75483756 |
Exon number |
3 |
Exons |
75482102..75482303,75482906..75483335,75483474..75483756 |
Genome context |
|
Sequence |
000001 ctccttattt agtttctttt ggcaatattg tgtagttttc agggcatatt ttttccctcc ttgactaaat tagtttctaa 000080
000081 ctattttatt ctttttgatg ctatggtaaa tggaattgtt ttcttaattt tctttttgga ttattaattg ctagtgtata 000160 000161 gaaatacagc tgatatttgc atgttgattt tgcatgctgc aaaaaaaaaa gaaaaatgtg tagcacttcc cccttcatgc 000240 000241 tctctcctgc tctaccatgt gaaggtcttc cttccccttc agccttctgc catgattgta agctttctga ggcctcccaa 000320 000321 ccttgcttcc tgtacagcct gtggaactgt gagttaaaca tttttttttt ttttttttgt aaattaccca gtctcaggta 000400 000401 gttcttcata gcactgtgag aacggactaa tcctttctcc ccccttcccc ttccccatac tcttcccctt cctctttcct 000480 000481 tttcctttcc cttttccttt tcctttcctt tcgttttttt cttttctctc cccagattgc tttggctaga acttctacta 000560 000561 ctgtgtcaaa agcaggaggc atttttgcct tgttcctgag catagagaaa gactttcagt ttgttatcat tgaaaatcat 000640 000641 gttttttttc tcattcattc tgttaatgtg gtgtcttgca ttaattgatt tttatacgtt gacccatcct tgcatttcat 000720 000721 taataaattc cacttggcat ggtatatgat gcatttaaca tgctgttgga gttagtttgc tagtattttg ttcaagattt 000800 000801 ttgcatcaat attcatcagt gatactggtc tgcttttttt ttttcttgta gtgtttttgt ctgattttgg tattgggtaa 000880 000881 tgttgccttt acagaatgat ttaaaaatgt ttctt |
Predicted Small Protein
Name | NONHSAT131877_smProtein_215:400 |
Length | 62 |
Molecular weight | 6904.0815 |
Aromaticity | 0.16393442623 |
Instability index | 82.0590163934 |
Isoelectric point | 5.50811767578 |
Runs | 8 |
Runs residual | 0.0216694931223 |
Runs probability | 0.0133589471825 |
Amino acid sequence | MCSTSPFMLSPALPCEGLPSPSAFCHDCKLSEASQPCFLYSLWNCELNIFFFFFCKLPSL R |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEHHHLLLLEELEEEELLLLL L |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL L |
PiMo | ooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiii i |